Theobroma cacao (cacao): 18599177
Help
Entry
18599177 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18599177
03041 Spliceosome [BR:
tcc03041
]
18599177
03036 Chromosome and associated proteins [BR:
tcc03036
]
18599177
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18599177
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18599177
mRNA cycle factors
Common to processing body (P body) and stress granule
18599177
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
18599177
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18599177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
IATP
Motif
Other DBs
NCBI-GeneID:
18599177
NCBI-ProteinID:
XP_007029089
UniProt:
A0AB32V4X6
LinkDB
All DBs
Position
5:complement(29211019..29216019)
Genome browser
AA seq
617 aa
AA seq
DB search
MRTSWADSVTNSASEIAVSDNNSVPRPTRSTYVPPHLRNRPASDAPILSGPATERTGFSG
TAGGSQWSRWSGGGGPKPEFGRLGQGYAGAGRGGGGGGGWNNRSGGWDRREREVNPFGDD
DVVDNTEQAFNEQENTGINFDAYEDIPVETSGENVPPPVNTFADIDLGEVLNQNIRRCKY
VKPTPVQRHAIPIALGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTVYPL
ALILSPTRELSGQIHEEAKKFSYQTGVKVVVAYGGASINQQLRELERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPNRGVRQTMLFSATFPRE
IQRLASDFLSNYIFLAVGRVGSSTELIVQRVEFVHELDKRSHLMDLLHAQRENGIHGKHA
LTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNEGNLSLARPLAELMQE
ANQEVPAWLTRYASRAPYSGNKNRRSGGGRFGGRDFRREGSFSRNLDYYGGGNSGSAYGV
PSNYGGGYAPGVTSAWD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggcagattctgtaacaaactctgcatctgaaattgcagtttcagac
aacaattccgtacctcgtcctactcgatccacttatgtcccaccccaccttcgtaaccgc
ccagcttccgacgcacccatcctgtcaggtccggccactgaaaggactggttttagcggc
accgctggtgggtcccagtggtcccgatggagcggcggcggtgggcctaagcccgaattt
gggcgtctgggtcaggggtatgctggagctggacgaggcggcggcggcggcggcggttgg
aataatagaagtggaggttgggataggagagaaagggaagtaaacccatttggtgatgat
gatgtagttgataatacggaacaggcttttaatgaacaagagaatacggggatcaatttc
gatgcttatgaggatattccggtggaaactagtggggaaaatgtaccaccacctgtaaat
acatttgctgatatagatttaggggaagtgttgaatcaaaatattaggaggtgcaagtat
gtgaaaccaactccagttcaacgtcatgcaatccctatagcattaggaggaagagatttg
atggcttgtgctcaaactgggtcagggaagacagctgccttttgctttccaattattagt
ggaattatgcgggagcagtatgtacagagaccgcgtgtagcacgaactgtttatcctctt
gctctcattctatctcccacaagggagctttctggtcagatacacgaagaggccaaaaag
ttctcctatcaaactggtgtcaaggtggtagttgcctatggaggagcatcaattaaccaa
cagttgcgagagctggagagaggagttgatattcttgtggcaactccaggaagactggtt
gatttgctagagagggctagagtgtcattgcagatgattaggtacttggcccttgatgag
gcagatcgcatgctggatatgggttttgagccacaaatcagaaagatagtggaacaaatg
gacatgccgaatcgaggtgtgagacaaacgatgttgttcagtgctacctttcctagagag
atacagagacttgcatctgattttctttcaaattacatattcttggctgttgggagggtt
ggttcaagtacagagttgattgttcaaagggttgaatttgttcatgagttggataagaga
agccatctcatggatcttctgcatgcacagagggaaaatggaattcatggcaagcacgct
ttgacattagtttttgtggagactaagaagggagctgactcattggaacattggttgtgc
atgaatggattcccagcaacgaccatccacggtgataggactcaacaggaaagggagcta
gcattgagatctttcaagagcgggaagaccccgattttagtagcaactgatgtggctgct
cgtggtcttgatataccccatgtagctcatgtggtcaactttgatcttcccaatgacatt
gatgattatgtccatcggattggaaggacagggcgtgctggtaaaacagggttggctaca
gctttctttaatgagggcaatctgtcactggcaaggccactagctgagctaatgcaagaa
gcaaatcaagaggtacctgcatggctcacccgttatgcatcccgggcgccttatagtggt
aacaaaaatcgacgatctggaggagggcgttttggcgggcgtgatttcagaagagagggt
tccttcagtaggaatctggattactatggtggagggaatagtgggagtgcatatggagtt
cctagcaattatggtggaggatatgctccgggcgtgacaagtgcttgggattag
DBGET
integrated database retrieval system
