Theobroma cacao (cacao): 18599647
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Entry
18599647 CDS
T02994
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18599647
Spliceosome [BR:
tcc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
18599647
Other components
Complex C specific factors
18599647
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
YabA
Motif
Other DBs
NCBI-GeneID:
18599647
NCBI-ProteinID:
XP_007029764
UniProt:
A0AB32V5V4
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Position
5:33142047..33145735
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AA seq
859 aa
AA seq
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MDEYQEMERFGMENDFEDGQWINGEFYYKKRKQKRTQTKDDVLYGVFASDTDSEDDDSSS
SRKRRKDFGKKPDLTKPVNFVSTGTVMPNQEIDENSKEENDNDVFDDNDNDSRPGLGSGV
GLGFGGNDSLRKSDGNDGGVEDDDHSFLPTAFGRKIKEGAQRREKERERLRMEKKSLGGR
REVGGGHGDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNMGMGFN
DFKEAKLPGLQQLDEKKSVNQQPVGRVKERLWSKNAKGRKKQQYVTVEELLVKKQEEGVE
VVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRDL
RNEKETALSLQKEKEKLEIEAARQKQQLANMDQIASVLALIEEENSSGKLTLESLEKSFR
DLQRNYADDYKLCNLSCIACSFALPLFIRMFQGWDPLENPSYGLEVISAWKDVLQREDSY
DIWEDVTTPYCQLVSEVVLPAVRISGINTWEPRNPEPMLGFLELWEKLLPSSIRDMILDT
VVMPKLSRAVDSWNPRKETVPIHVWVHPWLLMLGQKLEGLYQTIRMKLSNVLDAWHPSDP
SAYAILSPWKTVFDSVSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFYWVMSWASAIP
IHLMVDLMEKFFFVKWLQVLYHWLCSKPDFEEIKNWYMGWKGLLPQELLANESIRNQLNC
GLEMMVQAADHVPVVQPGLRENVTYLKVREQRQFEAQQRAAAHVQQPVAAGLGATVQMDG
VPEMSLKEVVEAYAQQHELLFKPKPGRMHNGQQIYGFGNISVIVDSLNQKVYAQKEDGWS
LVSLDDLLKMHYTSLARRR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggagaacgattttgaagacgggcaa
tggataaacggcgaattctactacaaaaaacgcaaacaaaagcggactcagacaaaagat
gatgttctttacggtgtttttgcgtctgataccgactcggaagacgatgattcttcttca
tcaaggaagagaaggaaggacttcgggaaaaaacctgacttgacgaagcctgtcaacttt
gtttccacaggtactgtaatgcctaaccaagaaattgatgagaattctaaggaagagaat
gataatgatgtttttgatgataatgataatgatagcaggcctggattggggtctggcgta
ggattaggttttggtggaaatgatagtttgcgaaaaagtgatggcaatgatggtggtgtt
gaggatgatgatcatagttttttgcctacggcctttgggaggaagataaaggaaggggca
caaaggagagagaaagagagggagaggttgaggatggagaagaaaagtttaggagggaga
agggaggttggaggtgggcatggagatgttgggggttttgagaagcatacaaaggggatt
gggatgaagttacttgagaaaatggggtataaaggtggtggtcttgggaagaatgagcaa
ggtattgttgctcctattgaagcaaagttgaggccgaagaatatgggaatggggtttaac
gattttaaggaggctaagttgccagggttgcagcagttggacgagaagaagagtgtgaat
cagcagccagttgggagagtgaaggagaggctttggtcgaagaatgcaaaggggaggaag
aagcagcagtatgttacagtggaagagctgttagtgaagaagcaagaagagggtgttgaa
gttgttcagaaggtgattgatatgagggggccacaggttagagttttgacgaacttggag
aatttggatgcagaagagaaggcaagagagaatgatgttccgatgcccgagttgcagcat
aacttgaagttaattgttgacttggcagagcttgatattcagaagattgatagggattta
aggaacgaaaaagagacagcattgagcttacaaaaggagaaggaaaagttggagattgag
gctgcacgccagaagcaacagttagctaatatggaccaaattgctagtgtgctggccctg
attgaggaagagaactcgtctggcaaattgaccttggagtctcttgaaaagagttttagg
gatctgcagaggaattatgctgatgattataaactgtgtaacttgtcctgcattgcatgt
tcatttgctttacctctgtttataagaatgtttcagggttgggatcctcttgaaaatcca
tcttatgggctggaggtgatatctgcatggaaggatgtgctgcaaagagaggacagttat
gacatttgggaggatgtaacaacaccttactgtcagctggtttccgaagttgttttacca
gctgtgagaatatctggaattaacacatgggagcctaggaaccctgaaccaatgcttgga
tttttggaattatgggaaaagttgctgccatcttctattcgtgacatgatattggatact
gtagtaatgccaaaattgtcaagagcagttgactcatggaacccacgtaaggaaactgtt
ccaatccatgtttgggtgcatccatggctgctgatgttgggacaaaagctggagggtttg
tatcagaccatacgtatgaagctgagtaatgttcttgatgcttggcacccaagtgatcca
tctgcttatgccatcctatcaccttggaagactgtgtttgattcagtgagctgggaacaa
cttatgcgtcaatatattgtcccaaagttgcagatcgctctgcaggagttccaaataaac
cctgcagatcagaagcttgatcagttttattgggttatgtcttgggcctctgcaattcct
attcatctcatggttgatttgatggagaaatttttctttgtaaagtggctgcaggttttg
tatcattggttgtgttcaaaacctgactttgaggagataaaaaattggtacatgggttgg
aagggacttctgccacaggagcttttggcaaatgaaagtatccgtaatcaacttaattgt
ggtcttgagatgatggttcaggctgctgaccacgtaccagtagtgcagcctggtttgaga
gaaaatgttacgtatcttaaggtgcgtgagcagaggcagtttgaggctcagcagagagca
gctgcacatgtgcaacagccggttgcagctggcctgggtgctacagtccagatggatggt
gttcctgagatgagtttgaaggaagtagttgaggcctatgcacagcaacatgagttacta
ttcaagcccaagcctggcaggatgcataacggtcagcagatatatggcttcggtaacata
agtgtaatagttgattcacttaaccagaaggtttatgcccaaaaggaggatgggtggtcc
ctggtctcacttgatgatttgttgaaaatgcactatacttctcttgcgaggagacgttga
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