KEGG   Theobroma cacao (cacao): 18599738
Entry
18599738          CDS       T02994                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18599738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tcc03000]
    18599738
   03021 Transcription machinery [BR:tcc03021]
    18599738
Transcription factors [BR:tcc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    18599738
Transcription machinery [BR:tcc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     18599738
  RNA polymerase III system
    TFIIIB
     18599738
  RNA polymerase I system
    SL1/TIF-1B
     18599738
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 18599738
NCBI-ProteinID: XP_007029885
UniProt: A0A061F123
LinkDB
Position
5:33735725..33736596
AA seq 195 aa
MAADRVLQSSHVSCSGVVPAIENVVSSVDLGCSLDLKAIALRARNTEYNPERFAALMMRI
RESRTTALIFSSGKMVCTGAETEQQSRLAARKYARIIQKLGFDVKFKDFQIQNIVASCDL
PFSVNLTHLGNSHYESSVYEPELFPGLIYRMKQSKVMIKIFSSGKIVVAGTHDRKEIFKA
FDNIYPILMSFRIDK
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcagctgatagagtgttgcagagtagccatgtttcatgttctggcgttgtcccggcc
attgagaacgtggtgtcatccgtcgacctcggttgctcgctggacctcaaagccattgcc
cttcgtgctcgaaatactgaatacaaccccgaaaggtttgctgcactgatgatgaggata
agggaatccagaaccactgcgcttatattctcctctgggaagatggtctgcactggagcc
gaaactgagcaacaatcccgcttggcagcccgcaagtatgctcggatcattcaaaagctt
ggttttgatgtcaagttcaaggatttccagattcagaacatcgttgcttcttgtgatctt
ccattttccgtcaaccttacacatttggggaattctcattacgagtcttcagtatacgag
ccagaattgtttccgggattgatttatcggatgaaacaatccaaagttatgattaagatt
ttttcttctggaaagatcgttgtcgcgggaacccatgatagaaaggagattttcaaagcc
ttcgataacatatatccaattcttatgtctttcagaatagacaagtga

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