Theobroma cacao (cacao): 18599740
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Entry
18599740 CDS
T02994
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18599740
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18599740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_2
HEAT_EZ
TPR_Trm732_C
UTP20
CLASP_N
DUF6752
DUF1776
RIX1
Motif
Other DBs
NCBI-GeneID:
18599740
NCBI-ProteinID:
XP_017977127
UniProt:
A0AB32WH72
LinkDB
All DBs
Position
5:complement(33746244..33769463)
Genome browser
AA seq
2054 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLNSLLKKVSQYLRSKNWD
TRVAAAHAIGAIAQNVKHTSLADLLSSVGAKMTEAGISGTIEDMVASPDLHSKIVSGVSF
RSFDINKVLEFGALMASGGQEYDIANDNSKNPKERLARQKQNLKRRLGLDMCEQFMDVSD
MIRDEDLIVDKLHHHGNGLDNRFYTSPSIHNIRQFVSRMVPNVTSKRRPSARELNMLKRK
AKINSKDQAKGWSDDGDTEVSPAHNASTPRGTCPDPVGSSKFDAVTDEDSSDHDGDGRWP
FRSFVEQLIVDMFDPVWEIRHGSVMALREILTHHGASAGVYLPDLNSDDALYLEVKDLDY
SSKMKREREIDLNMQVSPDELEVNLKRPKFEDGSFPVMDKMISAGQHGGFNVAVKIEDAA
STLLSGQFNGQHDISSMKIETEFCHDDMMYHSKEAVEVEEPKSYSEDKGAFANSDVLKIL
PENCELINLVKLARHSWLKNCEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQAL
GATFKYMHPSLVHETLNVLLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLHNLLGRVLPAC
KAGLEDPDDDVRAVAADALIPTAAAIVALKGQSLHSIVMLLWDILLDLDDLSPSTSSVMN
LLAEIYSQEDMMPKMLGTSTEKEKQNFDLNEVVHVDEVGEGKDLQENPYMLSMLAPRLWP
FMRHSITSVRHSAIRTLERLLEAGYKRSISEPAGSSFWPSFILGDTLRIVFQNLLLESNE
EILQCSERVWRLLVQCPVGDLEVAAVSFVSSWIELATTSYGSVLDATKMFWPVAPPRKSH
YRAAAKMKAVKLENESYGTVGLDSVRGAVSQEKNGDASTNLVKIIVGADAEMSVTNTRVI
TASALGIFASKLQANSLQYVVDPLWSALTSLSGVQRQVASMVLISWFKELKSREPSGNQE
IMQAFPDHLRKWLLDLLACSDPAFPTKDSVLPYAELSRTFAKMRNEASQLLHVVESSGMF
VDILSTVKINVESLTVDDAISFASKVPSLCNDNTGSESMQRNIDDIESAKQRLITTSGYL
KCVQSNLHVTVSSLVAAAVVWMSELPARLNPIILPLMASIRREQEEILQQKAAEALAELI
YHCIVRKPSPNDKLIKNICSLTCMDPSETPQAAVISTMEIIDDQDFLSFGTSTGKHKSKV
HMLAGGEDRSRVEGFISRRGSELALRHLCEKFGPTLFEKLPKLWDCVTEVLIPASPADKQ
QVVQAVESIKDPQILINNIQVVRSIAPLLDETLKLKLLMLLPCIFKCVSHSHLAVRLAAS
RCITTMAKSMTVDVMRAVIENAIPMLGDVTSVHARQGAGMLISLLVQGLGVELVPYAPLL
VVPLLRCMSDCDHSVRQSVTRSFAALVPLLPLARGLPPPIGLSEGFSRNAEDAQFLEQLL
DNSHIDDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASD
IAECHASNNIEESHSSLIVCPSTLVGHWAFEIEKYIDASLISTLQYVGSAQDRIALREQF
DKHNVIITSYDVVRKDADYLGQFLWNYCILDEGHIIKNAKSKITLAVKQLKAQHRLILSG
TPIQNNIMDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPKCSAKDAEAGALAMEALH
KQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHVKHEISSMVKHDES
AVAGGNIASPKASTHVFQALQYLLKLCSHPLLVVGEKVPESLALQLSELFSASSDIISEL
HKLHHSPKLVALQEILEECGIGVDTSASDGSVTVGQHRVLIFAQHKALLNIIEKDLFQTH
MKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLIFMEHDW
NPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINSENASLKT
MNTDQLLDLFASAETSKKGATASKRSESSIDGDPKLMGTGKGFKAILGGLEELWDQSQYT
EEYNLSQFLTKLNG
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaacagtcttcgcgtctcaatcgtttactcactttgttggatactggttca
acacaagcgacgagattcactgcagcgcgacagattggggatattgccaaatcgcatccg
caggacttgaattctcttctaaagaaggtttctcagtatcttcgtagtaaaaattgggac
acaagggttgctgctgctcatgccataggggctattgctcaaaatgttaagcacacttct
ctggctgatttactgtcttctgttggagcaaagatgactgaggctgggatatctggtact
attgaagatatggtggcatcacctgacttacattctaagattgtatcaggtgtttctttt
agaagttttgacatcaacaaggtgttggagtttggtgctttgatggcgtcaggtggacag
gagtatgatattgcaaatgataactcaaagaaccctaaagagagattggctcgccagaaa
cagaatttaaaacgacgtttaggtttggatatgtgtgagcagttcatggatgtcagtgat
atgattagagatgaggacctaattgttgacaaattacatcaccatggaaatggtttagat
aatagattttacacgtcgccatctatacataacatccggcaatttgtttcacgtatggta
cctaatgttacgtctaaaagaaggccaagcgcaagagagttgaatatgttaaagcgaaaa
gctaaaataaattcaaaagatcaagcaaaaggctggtctgatgacggagatacggaggta
tcaccggctcacaatgcatcaactccaaggggaacatgtcctgatccagtaggttcgagt
aagtttgatgctgttactgatgaagatagctctgatcatgatggagatggccgatggcct
ttccgtagttttgttgaacaactcattgttgatatgtttgatcctgtttgggagattcgc
catggtagtgttatggctttgagagaaattttaacacatcatggtgcttctgctggagta
tatttgcctgacttgaactcagatgatgcactgtatcttgaagtaaaagatttagattat
tcaagtaaaatgaagagagagagagaaattgatttgaatatgcaagtttcaccagatgaa
ttagaggtaaatctgaagaggccaaagtttgaagatggatcatttccagtgatggacaaa
atgatctctgctggccagcatggtggcttcaatgttgcagtgaagatcgaggatgctgca
tccactttgctctctgggcagtttaatggtcaacatgatattagttctatgaaaatagag
actgaattttgtcatgatgatatgatgtaccactctaaagaagctgttgaagtggaagag
ccaaagagttactcggaagataagggtgcatttgcaaattcagatgtactaaaaattctc
cctgaaaattgcgagctcataaacttagttaaactagccaggcattcttggcttaagaat
tgtgaatttcttcaggattgtgcaattcgtttcttgtgtgtactatcactagaccgtttt
ggagactatgtatcagatcaggttgttgctccagtacgagaaacttgtgcccaagcacta
ggtgctacttttaagtacatgcacccttcattagttcatgaaacattgaatgtcttgctg
caaatgcagcgtaggccagaatgggaaattcgtcatggaagccttcttggtattaagtac
ttggttgctgttcgacaggagatgctgcataatttgcttggccgtgttcttcctgcttgt
aaggctggattggaggatcctgatgatgatgtgcgggctgtggctgcagatgctctaata
cctactgctgctgctattgttgctttaaaaggtcaatcattgcattcaattgttatgctg
ctttgggatatactacttgatttggatgaccttagtccatccactagcagtgttatgaac
ctgttggcagaaatctactcccaagaagatatgatgcctaagatgttagggacatcaaca
gaaaaagagaagcaaaattttgatctaaatgaagtagttcatgttgatgaggttggagaa
gggaaagatttgcaggaaaatccttatatgttgtctatgttggcaccccgtttatggccc
tttatgaggcacagtattacatcagtccggcattcggcaatccgtactttggagaggctt
ctcgaagctggttataaaaggagcatttctgagccagctggtagttccttttggccatct
tttatactgggtgatacccttaggattgtattccagaacctgctgctagaatccaatgag
gaaattctgcagtgttctgagagggtttggaggttgcttgtgcagtgcccagttggggac
ttggaagttgctgcagtgtcatttgtttcctcttggattgagcttgcaactacttcttat
ggttcggttttagatgctacaaaaatgttttggccagttgctcctcctcgaaagagtcac
tatagggcagcagcgaaaatgaaagctgtgaagcttgagaatgaatcttatggaactgtt
ggcttggattctgtgagaggggctgtttctcaggaaaagaatggggatgcttctactaac
ttagtgaagataattgttggtgctgatgcagaaatgtcagtaaccaataccagagttatt
acagcttcagcgttgggaatatttgcatccaagttgcaggcaaattctttgcagtatgta
gttgatccactgtggagtgcacttacctccctgtcaggagttcaaagacaggtggcatcc
atggttcttatttcttggttcaaagagctcaaaagcagggagccatcaggaaaccaggaa
attatgcaagcttttcctgatcatcttagaaaatggttattggatttgctagcttgttct
gatcctgcattccctacaaaagattcagttctaccttatgctgagctgtcaaggacattt
gctaaaatgcgcaatgaagctagtcaattgctacatgttgttgagtcatctggcatgttt
gtagatatattgtcaactgtgaaaattaatgttgaaagcttaactgtagatgatgcaatc
agttttgcttcaaaagtgccatcattatgcaatgataatactggaagtgaatcaatgcaa
aggaacattgatgatatagagtcggcaaaacaacgtcttataacaacttcaggctattta
aaatgcgttcagagtaatttgcatgttacggtgtcctccttagttgctgctgctgttgtc
tggatgtcagagcttcctgcacgacttaatccaatcattttgcctttaatggcttcgatt
agaagagaacaggaggaaatactgcaacagaaggcagctgaggctcttgcagagcttatt
tatcattgcattgttcgtaagcctagtccaaatgacaagttaatcaagaatatttgtagt
ctgacttgcatggatccttctgagactcctcaagctgcagttatcagtaccatggagatt
attgatgaccaggatttcctgtcctttgggactagcacaggaaaacacaaatcaaaggtt
cacatgttagctggtggtgaagaccgatcaagagttgaaggttttatcagcagaagaggt
tcagaactagcattgaggcatttgtgtgagaagtttggtcctacattatttgaaaagctt
cccaaactttgggactgcgttactgaagttcttatacctgccagtcctgcagacaaacag
caagttgtgcaggctgttgaatcaattaaggatcctcagatcttgattaataatatccag
gtggtacgttctattgctccactgctggatgaaaccttaaagctgaaactgctaatgctt
cttccttgcatttttaaatgtgttagtcattcccatttggcagttagattggctgcttcc
aggtgtattactacaatggctaagtctatgactgtagatgtaatgcgggctgtgattgaa
aatgccattcctatgttgggggatgtgacatctgtccatgccagacagggtgctggcatg
cttattagtttgctcgttcagggattgggtgtggagctggttccatatgcacctttgtta
gttgtccctcttcttaggtgtatgagtgattgtgatcattctgtcagacagagtgtgaca
cgcagttttgctgccctggtacctcttctcccattggcgagaggtcttcctccacccatt
ggactgagtgaaggtttttctagaaatgcagaagatgcacaatttttggaacaactgctt
gataattcccatattgatgattacaagctttgcactgaattgaaagtgacattgaggagg
tatcaacaagaaggtataaactggttggcctttttaaaacgtttcaagcttcatgggatc
ctgtgtgatgatatggggcttgggaaaacgcttcaagcatcagcaattgtggcatctgac
attgcagagtgccatgcttcaaataacattgaggaatctcattcatccttgattgtttgc
ccatccacccttgttggacactgggcttttgaaatagaaaaatatattgatgcttcgtta
atatccacccttcaatatgttggttctgctcaggaccgcattgctttgagagaacagttt
gataagcataatgtaatcataacatcttatgatgttgtgcgcaaggatgctgattatctt
ggacagtttctctggaactactgtattttagatgaaggacatatcatcaaaaatgctaaa
tctaaaataacattggcagtaaagcagctgaaagcccagcatcggttaatactaagtgga
acaccgatccagaacaacatcatggatctgtggtccctttttgactttctaatgccagga
tttcttggaacagagagacagttccaagccacttatgggaagccactgctggctgctaga
gatcctaaatgttcggccaaggatgctgaagctggggcacttgctatggaagcactgcac
aagcaggtcatgcccttcctacttaggcgaacaaaggatgaggtcttgtctgacctgcca
gagaaaatcattcaggacagatactgtgaccttagccctgtccaattaaagctctatgaa
cagttttctggttcacatgtaaaacatgaaatttcaagcatggtaaagcatgatgagtca
gcggttgcaggaggaaatattgcttcaccaaaagcatctacacatgtatttcaggcactg
caatacttgctaaaactttgtagccatcccttgcttgtcgttggtgaaaaggttcctgag
tctctcgcattgcagttgtcagagctcttctctgcgagttcagatatcatttctgaactt
cataaactccaccactctcccaaattagttgcccttcaggaaattctggaagagtgtgga
attggtgtggatacttctgcttctgatggctctgtcactgttggacagcacagggttttg
atatttgctcaacataaagccttactgaatatcattgaaaaggacttgtttcagacccac
atgaagaatgtcacatacctacggctggatggatcagttgaaccagaaaaacgttttgac
attgtgaaagctttcaattctgatccaaccatagatgcccttttgcttacaacacatgtt
ggtgggcttggtctgaacttgacatctgctgataccctcatttttatggaacatgactgg
aatcccatgcgtgatcatcaggcaatggacagggcacacagattaggccaacggaaagtt
gtgaatgttcaccgtctcatcatgcgtggcactctggaagagaaagttatgagcctccaa
cggttcaaagtatcagttgcgaatgctgttatcaattctgagaatgccagtctgaaaacc
atgaacactgaccagttgcttgatctatttgcctcagcagaaacatctaaaaagggagca
acagcttcgaaacgttcagagagcagcatagatggagacccaaaattaatgggtacaggg
aaggggttcaaagccatccttggtggattggaggagctttgggatcagtcacagtatacc
gaagaatacaatttaagccagttcttaacaaaacttaatggctga
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integrated database retrieval system
