Theobroma cacao (cacao): 18599744
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Entry
18599744 CDS
T02994
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18599744
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18599744
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Effector_1
Motif
Other DBs
NCBI-GeneID:
18599744
NCBI-ProteinID:
XP_007029897
UniProt:
A0A061F7B0
A0AB32V642
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Position
5:33796708..33807024
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AA seq
572 aa
AA seq
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MSSDTFDGQILTEKLSKLNNSQQSIESLSRWCITHRKKAKQIVETWDKLFNSSQKEQRVS
FLYLANDILQNSRRKGSEFVNEFWKVLPGALKHVYENGDEYGKKAVTRLVDIWEERKVFG
SRGQNLKDEMLGKNPPPPPPPLSVNNGKSSNPIKIVKRDAHAVRIKLAVGGLPEKILTAY
QSVLEDNQNEDIALNKCNAAVQQLHKIGEDVESSLAQGNQNESALLDELQQQEIALQQCI
EQLENVETIRATLIFQLKEALQEQESKLELIHSQLQVARGQIEQASNVRKRLTLPTVPGH
LSATTISTAEGAIVVEQNLPSAQPTGTPPHPHHAQPVLSFAPSMTTEEDNKKAAAAAVAA
KLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSGGFTSGLSMFPPEKRPKLEKPMPVSDA
SNSDVSSTAYFSPLQQQAMTNMPLAPSTSVQPMSQGNQIQAPFASAPPPPPPPLSPANPP
ASQYVQSTGMMVGVMPYGYGANTLPPPPPLPPHIAMSLARPSSQPLQQLQSQSLQQPQSQ
PQQQPATGGFYRPPGIGFYGQNPQSTPPVPRQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgatacttttgatggacagatactaactgagaagctgtcaaaactcaacaat
tcacaacaaagcattgaatcgttgtctagatggtgtattactcaccggaagaaggcaaaa
cagattgttgaaacatgggacaaattgtttaactcttcccagaaagaacagcgtgtttct
tttctgtatttggctaatgacattctgcaaaatagcaggcgaaagggaagtgaatttgtg
aacgaattctggaaagtacttcctggagctctcaaacatgtgtatgaaaatggtgatgag
tatggaaagaaagcagtaacaagattggttgacatatgggaagaaaggaaagtttttggt
tctcgagggcagaatcttaaagatgaaatgcttggtaagaatcctccccctcctcctccc
cctttatcagtgaacaatggaaaaagctcaaatcctatcaagatagtcaaaagggatgct
catgcagtgagaattaaattggctgttggaggtcttccagaaaagatactaactgcatat
caatctgtacttgaggacaatcaaaacgaggacattgctttaaacaagtgtaatgctgct
gtacaacagttgcataaaattggggaagatgttgaaagtagtttagctcaagggaatcag
aatgaatctgcattgctggatgagctacagcagcaagaaattgcgctccagcaatgcatt
gaacaacttgaaaatgttgaaacgattagggctaccctgatttttcaacttaaagaagca
cttcaggaacaggaatcaaagctggagcttattcatagtcagctgcaagttgctcgtggt
cagattgagcaagcaagcaatgtaaggaagaggctaactttacccactgtgcctggccat
ctaagtgcgacaactatttcaacagcagagggtgcaatagtggtggaacagaaccttcct
tcagctcagccaactggcactccacctcatcctcatcatgcacaacctgtgctttccttt
gcaccttcaatgacaactgaagaagataacaagaaagcagctgctgctgctgttgctgct
aagcttgctgcttcaacatcttctgctcagatgcttacctctgtgctttcatcccttgtt
gcagaagaagctgcttctatgaatggcagcttaaaatctggtgggttcacatcaggatta
tcaatgtttcctccagaaaagcgtcccaaacttgagaaaccaatgcctgtatcggatgca
agcaactcagatgtaagcagcacggcttattttagcccactacagcagcaagcaatgacc
aacatgccacttgcaccatcaactagcgtgcaaccgatgtcccaaggcaaccagatccaa
gctccatttgcttctgctcctcctcccccgccccctcctctatctcctgcaaatccacca
gcaagtcaatatgttcaatcaactggtatgatggtaggggtaatgccttatggttatgga
gcaaacacactgccacctccacctcctcttcccccacatatagcaatgagtttagctagg
ccctcttctcagcctctgcagcagctgcagtctcagtctttgcagcagccacaatcacag
cctcagcagcagccagccactggaggattttaccggccaccagggattgggttttatggg
caaaatcctcagtcaacaccacctgtacctcgacagtga
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