Theobroma cacao (cacao): 18599780
Help
Entry
18599780 CDS
T02994
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18599780
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
18599780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF1033
Motif
Other DBs
NCBI-GeneID:
18599780
NCBI-ProteinID:
XP_007029946
UniProt:
A0AB32V4F1
LinkDB
All DBs
Position
5:32623408..32634086
Genome browser
AA seq
605 aa
AA seq
DB search
MVYCNNCSRNVSGERFYDGPLCCNFCGKVLEEYNFSSEPQFVKDSAGQSKLSGNFIKSVQ
DISDSRRRTLDKAFDDMRCMKDALSIDDYSDDVVETASRFYEIALERNFTRGRRTELVQA
SCLYLACRQKRKPFLLIDFSSYLSINVYELGSVYLQLCYVLYLADTKDLQKLIDPSIFIH
KFTNVLIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKCSKSDI
IRVVHVCEATLTKRLVEFESTDSGSLTIEEFTEKERELRTSSLTKKQPNIGSKEASAHEV
LCKHMDRKPFAYGLCEECYEEFMKVSGGLDGGSDPPAFQRAEKERIAKLSIEENANRASG
SPFASGPEKPESIGVSGGTTKKAAFDEGDNDKLPGVDGSGDESDNFSDIDDLEVDGYLHN
EEEKRFKKIIWEEMNREYLEEQAAKEAAAAAAKEANMANYDKCPEDLQAAQELAAAAAAV
VAKSRKERQQKRAAEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDEPVASSEK
PKKQKNESHSDEKEDKVSKIGKEEGDLADEYNDVEGDGGGTKFDNNLDFDNEVYDYDDDY
GYDEY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggtctactgtaataattgttccagaaacgtttctggagaacgcttctatgatggtcct
ttgtgttgtaatttttgtgggaaggtgttggaagaatacaatttttcgtctgaaccgcaa
tttgttaaggattcagctggccagagcaaactgtctggaaattttataaagtctgttcaa
gatatttcagattcacgtaggaggacgttggataaagcttttgatgatatgagatgtatg
aaggatgcattaagtattgatgattatagcgatgacgtcgttgaaactgctagccgcttt
tatgaaattgcccttgaacggaatttcactagggggcgaaggacagagctagtacaggct
tcatgtctttatcttgcatgtcggcaaaagagaaagcctttccttcttattgatttttca
agttatttaagcataaatgtttatgagctaggctctgtctatttgcagctttgctatgtg
ctgtaccttgctgacacaaaagatcttcaaaaactaattgatccctcaatttttattcat
aaatttacaaatgttttgattcctgaagggaatgatgaagttgtcaaaactgcacgggac
attttagctagcatgaaacgggactggatgcagacagggagaaagcccagtggattatgt
ggtgcagcactatacatttctgcactttcacatggtctgaagtgttctaagtcggacatt
ataagggttgtgcacgtttgtgaagcaacattgacaaagcggttggttgaatttgagagt
acagactctgggagcttaacaattgaggaatttacggaaaaggagagggagcttcgaact
agttcattaactaaaaaacaaccaaatattgggtcaaaagaggccagcgcgcatgaggtg
ctctgtaagcatatggacagaaaaccttttgcctacggactttgtgaagaatgttatgaa
gagttcatgaaagtttcaggaggacttgatgggggatcagatccacctgcattccagcgt
gctgagaaagagagaatagcaaaattatctatcgaggaaaatgctaatagggcgtcaggc
agcccttttgcaagtggacctgaaaaacctgaaagtattggggtttcagggggcacaact
aaaaaagcagcctttgatgagggtgacaatgataaattacccggagttgatggtagtggt
gatgaatcagataacttttctgatattgatgatttggaggttgacggttatcttcacaat
gaggaggagaagcgtttcaaaaagataatttgggaagaaatgaaccgcgaatatcttgag
gaacaagcagccaaggaagcagccgcagccgctgccaaggaagctaatatggccaactat
gataaatgtccagaggatctccaagctgcacaggagcttgctgcagctgctgcagcagta
gtggcaaaatctagaaaggaaaggcaacaaaagcgagctgctgaagcaaaaaattctggt
cctcctcagaccgctgcagaagcgacccgccgaatgctggctagaaagagactaagctca
aaaatcaactatgatgcgttggagaaactatttgatgaaccagttgcttcttcagagaaa
cccaagaaacaaaagaacgaatcacattcagatgaaaaggaagacaaggtttccaaaatt
gggaaagaagaaggtgatttagcagacgaatataacgatgtggaaggggatggaggagga
acaaagtttgacaataacctcgactttgacaatgaagtctatgactatgacgatgattat
ggttatgatgagtactga
DBGET
integrated database retrieval system
