Theobroma cacao (cacao): 18599795
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Entry
18599795 CDS
T02994
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18599795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18599795
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18599795
Enzymes [BR:
tcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
18599795
Messenger RNA biogenesis [BR:
tcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
18599795
Transfer RNA biogenesis [BR:
tcc03016
]
Prokaryotic type
tRNA degradation factors
18599795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
WHD_DUF6293
Motif
Other DBs
NCBI-GeneID:
18599795
NCBI-ProteinID:
XP_017977447
UniProt:
A0AB32WD85
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All DBs
Position
5:34213158..34229883
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AA seq
946 aa
AA seq
DB search
MLVNPSGVQSTPCYSHPSHFTFSNRCKLFLSPSCPRFLSSKKSSKFCSLSLLLSRNGGGG
NRFSVRALLEPEVSESIAAAADGAGGGDGGSGILQPVSVKIPFGDREILVETGHIGRQAS
GSVMATDGETIVYTSVCLSDVPSEPSDFFPLNVNYQERFSAAGRTSGGFYKREGRTKDHE
VLICRLIDRPLRPTMPKGFYHETQLLSWVLSYDGLHSPDALAVTAAGLAVALSEVPNSKA
IAGVRVGLLGDRFVVNPTTKEMEDSTLDLFLAGTDSAILMVEGYCDFLPEEKLLEAVQVG
QDAVRAICTAVDALVKKCGKPKMLDAIKLPPPGLYRRVEKIAGDELHKVLQIRSKIPRRK
AISLLEENVINILTEKGYISTEDNSGTAETIQDWLEEEDEDEEIVVDGEVDEGDVHIKPV
SRKSTPLFTEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRSPEGIRSITSRCGLLPRAHGS
ALFTRGETQSLVVVTLGDRQMAQKVDNLANVEEFKRFYLQYSFPPSCVGEVGRMGAPSRR
EIGHGTLAERALEPILPSEDEFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPLKC
SIAGIAMGMVLDTKEFGGDGAPLILSDITGSEDASGDMDLKVAGTEDGITAFQMDIKVGG
ITLPVMKEALLQARDGRRRVLGEMLKCSPPPAKSLSKYAPLIHIMKVAPDKVNIIIGSGG
KKVKSIIEETGVEAIDTQDDGIVKITAKDLSSLEKSKSIISNLTMVPTVGDIYRNCEIKS
IAPYGVFVEIAPGREGLCHISELTSDWLAKAEDAFKVGDRVDVKLIEVNDKGQLRLSRRA
LLPVPETNSEEPSSEQLTGHQAKVITDSGKASDKSTPKKYVNVPKSDALAQEKLEQPKDK
SSGTKISSSSKSSSAENTLLPRKKVFKRIKKSTSKAVTGVSGKDGE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaaatcctagcggcgtacaaagcacgccgtgctactctcacccttcgcatttc
actttctccaaccgttgcaaactgtttttatctcctagttgccctcgcttccttagttcg
aaaaaatcctccaagttttgctctctctcgctgcttttatcgagaaatggcggtggtggt
aaccgcttttccgttagagctttgctggaaccggaagtttccgagtccattgcggctgct
gccgatggcgctggtggtggtgatggtggttccggtattctgcaaccggtttctgtcaaa
attccgtttggagatagagagattctggttgagacaggtcatatagggaggcaagctagt
ggttctgtaatggcaacggatggagaaactattgtatacacatctgtttgcttgtcagat
gtcccaagtgagccgtctgatttttttccccttaatgttaattatcaagaacgtttttcg
gcagcaggtcgaacgagtggtggtttctataaacgagaagggaggacaaaggatcatgag
gttcttatttgtagactgattgataggcctttgcgtccgactatgcctaagggcttctac
cacgaaactcagttactatcttgggttttgagttatgatggtttgcactcaccagatgct
ttagcagttactgcagccggattagcagtagctctttcagaagtgccaaactcaaaagca
atagcaggagtgcgagtaggtttgcttggtgataggtttgttgtgaatccaacaacaaaa
gagatggaagactcaacattagacctatttttggcaggcacagatagtgctatattaatg
gttgagggttattgtgattttctaccggaagaaaagttgcttgaagcagtacaagtcggg
caggatgcagtgagagcaatctgcactgctgtggacgctttggtcaagaagtgtgggaaa
ccaaaaatgcttgatgcaatcaaactgccacctcctgggctttataggcgtgtggaaaaa
attgccggcgacgaattgcataaagtgctgcaaattaggagcaaaataccaagaagaaag
gccatctcattgttagaagagaatgttattaatatactgacagagaagggatatatcagt
acagaagataattcaggaactgctgaaacaatacaagactggcttgaggaggaagatgag
gatgaggaaattgtcgtagatggtgaagtagatgaaggtgatgtgcacataaagcctgtt
tctcgaaaatccactcccttgtttactgaggtagatgtgaagctggtatttaaggaggtt
acgtccaaattcttacgaagacgtattgtggagggaggaaaaagaagtgatgggaggtca
ccagaagggatacgttcaatcacatcaagatgtggattgcttccaagagcgcatggaagt
gctctcttcacacgtggagaaacacagtcactggtggtggttacacttggtgatagacaa
atggcacaaaaagtagacaatctagcgaatgtagaggaattcaagaggttctatcttcag
tactcatttcctccatcatgtgttggagaggttggacgaatgggagcacctagtagaaga
gaaattggacacggcactcttgcagagagagctcttgagcctatattgcctagcgaagat
gaatttccttacaccatacgtgttgaaagtaccattactgaaagcaatggctcgtcaagc
atggcatctgtttgtggaggttgcttggcattgcaagatgctggtgttccactaaagtgc
tctattgctgggatagcaatgggtatggtgttggacacaaaagaattcgggggagatggt
gcaccacttattctttctgacattactggatctgaagatgcgtctggagatatggatttg
aaggttgctggaactgaagatggcataactgcatttcagatggacataaaggtaggaggg
atcaccttacctgtcatgaaagaggcactcctacaagcaagggatggtcggagacgtgtt
cttggtgagatgttgaaatgttcacctcctcccgcaaaaagtctctctaagtatgctcca
cttattcacatcatgaaggttgctcctgacaaagttaacattattatcggttctggtggg
aagaaggtaaaaagcattattgaagaaactggagtagaggctattgacacacaagatgat
ggaattgtaaaaatcactgcaaaggatttatcaagtctggagaagtccaaatccattatt
agcaatctgacaatggttccaactgttggtgatatttacaggaactgtgagatcaaatca
attgctccatatggagtttttgttgagatagctccagggcgtgagggactttgccatatt
agtgagctgacttcagactggttggccaaggcagaagatgcctttaaagttggtgatcgt
gttgatgttaaacttattgaggttaacgataagggacaacttcgccttagccgccgcgca
ctacttcctgttcctgaaacaaattcagaggaacctagttcggagcagctcactggccat
caagctaaagttattactgattctggaaaagcatctgacaaaagtacacctaaaaagtat
gtgaatgtccccaagtctgatgctttagctcaagagaagcttgaacagcccaaagataaa
agtagtggtacaaaaatttcaagctcatccaaaagtagttctgcagagaatactctgctg
ccacgaaagaaggtttttaagagaataaagaagagcaccagtaaagctgtcactggtgtc
tctggcaaagatggagagtag
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