Theobroma cacao (cacao): 18599796
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Entry
18599796 CDS
T02994
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03030
DNA replication
tcc03410
Base excision repair
tcc03420
Nucleotide excision repair
tcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18599796
03410 Base excision repair
18599796
03420 Nucleotide excision repair
18599796
03430 Mismatch repair
18599796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18599796
03036 Chromosome and associated proteins [BR:
tcc03036
]
18599796
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18599796
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18599796
DNA Replication Termination Factors
ELG1-RFC complex
18599796
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18599796
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18599796
Check point factors
HRAD17(Rad24)-RFC complex
18599796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Rad17
DNA_pol3_delta
Sigma54_activ_2
AAA_22
DUF815
RuvB_N
AAA_5
AAA_23
RsgA_GTPase
Mg_chelatase
ABC_tran
AAA_29
AAA_2
AAA_16
AAA_24
T2SSE
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
18599796
NCBI-ProteinID:
XP_007029981
UniProt:
A0A061F0P3
LinkDB
All DBs
Position
5:34231217..34236000
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQVMVHQDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
SSAEKVKVENRNWKIDIGSRTIDLELTTLSSTNHVELSPSDVGFQDRYVVQEIIKEMAKN
RPIDTKGRKGYKVLVLNEVDKLSRQAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNIRVNAPSEEQIIKVLEFVGKKEGLQLPSGFAARIAEKTNRSLRRAILSFETCRVQQY
PFTSSQAIPPMDWEEYISEIATDIMKEQSPKRLFQVRGKVYELLINCIPPEIILKRLLHE
LLKKLDAELKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagataaatacagacccaaaaccctagaccaagttatggttcatcaagac
attgcccaaaatctcaaaaaattggttacagagcaagattgcccacatttactcttctat
gggccatctgggtctggcaagaaaaccctaattatggctcttcttagacagatctttggt
tccagtgctgaaaaggtgaaagtggagaataggaattggaaaattgatattggaagcaga
accattgatctggagttgaccacattatcaagcaccaaccatgtggagttgagtccaagt
gatgtaggctttcaggacagatatgtagttcaagagataattaaagaaatggctaagaat
agaccaattgacaccaaggggagaaaaggatataaagtgttagtactcaatgaagttgac
aagctttcaagacaagcccaacattctcttcgaagaacaatggagaagtatagtgcttct
tgccggctaattttgtgctgtaatagttcttcaaaagtcactgaggccatccgttctcgt
tgtctgaatatccgagtaaatgcaccttcagaagagcagattattaaggtgttggagttt
gttggaaagaaagaagggttgcaacttccatctggttttgcagctcgcattgcagaaaag
acaaatcggagtttaagaagagctatattgtcatttgagacttgccgcgttcaacagtac
cctttcacaagcagccaagcaattccaccaatggattgggaggaatatatatccgaaata
gcaactgacataatgaaggagcagagccctaaaaggctgtttcaggttcgagggaaggta
tatgaattgcttattaattgtatccctccagagataattttgaagaggctccttcatgaa
ttattgaagaaattggatgcagaactaaagcatgagatctgccattgggctgcatattat
gaacataggatgcgtcttggacagaaagccatctttcacattgaagcatttgttgccaag
ttcatgagcatttacaaggctttcttgattgcaaccttcggctga
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integrated database retrieval system