Theobroma cacao (cacao): 18600285
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Entry
18600285 CDS
T02994
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18600285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18600285
03021 Transcription machinery [BR:
tcc03021
]
18600285
Transcription factors [BR:
tcc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
18600285
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18600285
RNA polymerase III system
TFIIIB
18600285
RNA polymerase I system
SL1/TIF-1B
18600285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
18600285
NCBI-ProteinID:
XP_017977081
UniProt:
A0AB32WGW6
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All DBs
Position
5:complement(37369673..37373657)
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AA seq
201 aa
AA seq
DB search
MAEQGGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD
ETYTAFENIYPVLTEFRKNQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaggtggcttggaagggagccagccagtggatctttccaagcacccatct
ggcattgttcccactcttcagaacattgtatcgactgtgaacttagactgcaagttggat
cttaagcaaattgctctgcaagcacgaaatgcagaatacaatcctaagcgttttgctgct
gtcattatgagaatcagggagcctaaaactacagctttgatttttgcttctggaaagatg
gtctgtactggtgccaaaagcgaacagcagtctaaattggccgcaaggaagtatgccaga
atcatccaaaagcttggttttcctgctaagtttaaggacttcaaaattcagaacattgtt
gggtcctgtgatgtcaaattccctatccgacttgaaggtcttgcatactcccatggtgcc
ttttcaagttatgagccagaactatttccaggcctgatctatcgaatgaaacaaccgaag
attgtacttcttatttttgtgtcagggaagattgtgatcactggtgctaaggtgagagat
gagacatacacagcctttgagaatatatatcctgtccttacggagttcaggaagaaccag
caatga
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