Theobroma cacao (cacao): 18600346
Help
Entry
18600346 CDS
T02994
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18600346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18600346
Spliceosome [BR:
tcc03041
]
Complex B
Other components
RES complex
18600346
Complex C
18600346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
M
Motif
Other DBs
NCBI-GeneID:
18600346
NCBI-ProteinID:
XP_007030783
UniProt:
A0AB32V6E1
LinkDB
All DBs
Position
5:complement(37721782..37726213)
Genome browser
AA seq
539 aa
AA seq
DB search
MATSSSLKEYLKRYESKNEEEEQKKKRKKKKAKAKPESSGVFVVDEDPVWQKPVNLEEDN
DGNDSPDEKPLVDEDIEVKRMKKLEQIRLTRGLNSIAEDGSGWVSLSPKRTNTLDPNSDV
SPPRRQRARNDTPSPEPGLRHSNSEREIEDLSPLRQPRSPGLKSDLSPPRRSRVQNDTPS
AREDADLSPPRRRPSRTDLPEPLVKAAKEGSDLSPPRKRRVRNDTPSPEPVLNQSDTDLS
PPRKRRARNDSPSPERRMKPTRKDTDLLPLRKRSRRHHTPSPEPDMSPPRRSRPQTSEVV
NDSDLSPPRKHRKESTGPASLKEQPKTGLISGSEIREEISKTKKDDWLRFKEMDPSISGR
GAEPVYRDKTKGERISKEEFLKSKRKGEDKPKEKELEWGKGLAQKRETEARLQELEREKD
KPFARNRDDPELDNMLKDRIRWGDPMAHLVKKKHSVPVLRDLGDAEKMKESGFIIPQDIP
AHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctagttcactgaaggaatatctaaagcgatacgagtcgaaaaacgaggaa
gaggaacagaagaagaaaaggaagaagaagaaggcgaaagccaaaccggagtcctcaggc
gttttcgttgttgatgaagatccagtctggcaaaaacctgttaacctcgaagaagacaat
gatggcaatgattcacccgatgagaagccattagtggatgaagatatagaagtaaaaaga
atgaaaaagctggagcagattaggttgacgagggggttaaactcaattgctgaggatggt
agtggttgggtttcgctttctcctaaacgcaccaatactttggatcctaattctgatgtt
tcccctcctcgtaggcagagggctcgaaatgacacgccttctccggaacctgggcttagg
cattcaaactctgaaagagaaattgaggatttatcacctctgagacaaccacgatcccct
ggcttgaaatctgatttatcaccaccaaggagaagtagggttcagaatgacacaccatca
gcaagagaagatgctgatttatcacctcctcgtaggaggccatctcggactgacttacca
gaacctctagttaaggctgcgaaagaaggttctgacttatctccgccgaggaaacggagg
gttcggaatgacacaccttcaccagaacctgtactgaaccaatcagatactgatttgtca
ccaccccggaaacggagggctagaaatgactcaccttcaccagaacgcagaatgaagcca
acgagaaaagatactgatctgttgcctctacggaaaaggtcgagacgccaccatacacca
tcacctgagccggatatgtccccaccaagacgatctcgtcctcaaacatcagaggttgtt
aatgattcagatctctcccctccaaggaaacataggaaggaatcaactggtccagcttcc
ttgaaggagcaaccaaaaactggattaatttctggcagtgaaatccgggaagaaatttct
aaaaccaagaaggatgactggttaaggtttaaggagatggatccatctataagtggacga
ggagctgaacctgtatatcgtgataagacaaaaggggagcgtatatcaaaggaagagttc
ctgaagtcaaaacgaaaaggggaggataagcccaaggagaaagaattggagtggggcaaa
ggcttagcccaaaagcgggaaactgaagctaggctgcaagaattagaacgcgagaaggat
aagccatttgctcgaaacagggatgaccctgagcttgacaatatgttgaaggatagaata
agatggggtgatcctatggcgcatttggtcaagaaaaagcattctgtgccagttcttaga
gacctaggggatgctgagaaaatgaaggaatcagggtttataattcctcaggacattcct
gcacatagttggattgtaagaaagttagatgctgcaccaaatcgatatggtataagacca
ggaagacactgggatggagttgatcgtagtaatggttttgagaagaaaatgttcacaaaa
ttaaatgagaaacgggctaccgaaagggaagcatatctttggtctgtgtcggacatgtga
DBGET
integrated database retrieval system