Theobroma cacao (cacao): 18600364
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Entry
18600364 CDS
T02994
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
18600364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18600364
Enzymes [BR:
tcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
18600364
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
18600364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
Zn_ribbon_RanBP
DNA_pol_B_exo1
Zn_ribbon_TEX13
divDNApol
Motif
Other DBs
NCBI-GeneID:
18600364
NCBI-ProteinID:
XP_017977037
UniProt:
A0AB32WGX3
LinkDB
All DBs
Position
5:complement(37793523..37811715)
Genome browser
AA seq
2929 aa
AA seq
DB search
MSNSQPDSNVFSVRIVSIDHYMARPISGYDTCYSSFQGERVNEVPVIRIYGSTPAGQKTC
LHIHRALPYLYVPLVDILPQGSHTHQEDHACADALALALEKALKLKVGAGSKRQHVHGCS
LVRAKKFYGYRSSEELFVKIYLYYPHDVSRAANLLLAGAVLDKSLQPHESHIPFILQFLV
DYNLYGMGHLHLSRMKFRNPIPDLSHPRKINNCGQHGQKMDDLTLKAAGFQADSSRDVCI
NSPVWISSTIPGEWMWHVSAELDVSSDQDICHVKRQSLCELEGDATLDDILNQQFKIYTS
LSQTCSDVKMVQSLIPIWEEECERTGMHEMALPSYPDRPLSEDVLKALSLGVGFEDELMK
LCSKVEETLSHNELGFEQSVIPSANEENLVGPTHINLNHTVPQALSCSKEQSLLGSLSQH
CKPCEKEMNAASSEKKDVCPELLSVGEILSSQTATDTEALGLLAWLANSHAADDINSDDE
LVRETILTPLLPATTIDKVLEKASIDYESESQKECQDILDSVGDLIEFDGLKERNSHSYD
HIQISSGKHIPQTDGSSDDLGLSPSAGSVANSSKADMKTELKRSSQDTSKTFSTKRKRKK
LLWGSLPLSVTGKGKDNSDSVSFNITEACADEIKECLGTSFSAENDLGKASDPLNKNAHA
SDDKQEAGILVECTVRDLMRRKRSRRIEPADCGSVRSENVHLKMEKGKDSFFCPKQLNFH
GSHNELDKKGPGSLNHSPSLANEQKEFPEAVGFKPTHSDSVYCTLPQLSGISNPAQANTG
HPEQMGKKLALNFYPKKHDSAISIGHCETYKGKEFDFRVTSAESRNSDAHTSKAHKEIDS
PDERLQQTDTNGSWCLSASPRTHKMLGMDGYIHETYYEGEISLSADKPVGIDATTDKSYP
QNEDCGGGKQGCITGLVVDVEAKPVELIGMTFCKKPPTADWNDGATENVTHLPTTQHSPS
LFNEENCQGTSGRALDEVLPFFSRGCEEEKEVQNKCLGNNNSNFHQEAALGVPIHYQNDG
SFLYLLTPVSSPPSPDSVYRWLSCDEEGSHRQSNAVSAESPSLTGSTECLIASENSSPVN
CNEALTKSSSKYHMTSMLEQGHPEKNMVLGSEVKSCSNESRTPCQSEENIRTVNACADGS
QDMSQISGPDGKSRPTPLSQIGFRDPASVGAGQQLTLLSLEVHTESRGDLRPDPRFDAVN
VVALAIQNDNDSETEVHVLLYSKTGFYQRNLDGIFGLKVFVFSEEKHLFGQFMKILCSLD
PDILMGWDVQGGSLGFLAERAAYLGIGLLNKISRTPSETKIKAEETNISQKGSQEELLSK
PLIADSIVMEDAIIEDEWGRTHASGVHVGGRIVLNVWRLMRGEVKLNMYTVEAVAESVLR
QKIPSIPYKVLTKWFSSGPAQARYRCVEYVVERAKLNLQIMNKLDMINRTSELARVFGID
FFSVLSRGSQFRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPV
VVLDFQSLYPSMIIAYNLCFCTCLGKIANSKVNTLGVSSYAPDPNVLRNLKDQVLLTPNG
VMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLTPSQQVLQRIFNARQLALKLIANVTY
GYTAAGFSGRMPCAELADSIVQCGRSTLEKAISYVNAHEKWRANVIYGDTDSMFVLLKGR
TVKESFKIGHEIASAITAMNPNPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQVKPVFDA
KGIETVRRDTCGAVAKTMEQSLRLFFEHQDIPKVKAYLHRQWTRILSGRVSLQDFVFAKE
VRLGTYSTKVGSLPPAAIVATKAMRADLRAEPRYAERVPYVVIHGEPGARLVDMVVDPLE
LLAINSPYRLNDLYYINKQIIPALQRVFGLVGADLNRWFSEMPRLAREAFGKCGVHALNP
QRTRIDYYYLSKHCILCGDLVQASAHLCGKCSENETAAATAIVGRTSKSEREMQHLVAIC
RHCGGGDWLVESGVKCNSLACSVFYERRKVQKELQGLSAVATDKGLYPKCMFNSSLTLFE
PRRKKKMAQSPFTLLLLKRLSLSSKIPLKLNNFSPSPIFTTTKSKPFSSASPQPAVSTTQ
DPPKPTSLSARMSFVFDQIDQIERQRQQQSVQYDDTLQRIRAWRQSKKEAQATQQQFQPK
EQSPESGIAKNDASTTDFTLSDSPELTESRNGDALRRIRAWRESKHVENKECSEGETAKN
EANSSVFCTDPVAELGELERQKGNEVELVHPWPEWIELMERLVQQNYFDHKRRDEGKMVE
ELGFDLSNVVEEVKDNAGIDFKDFRTVQTACLNFGKDRFDILRSLSRQDVQNLVGFGCPS
ADKKVVFSAKLLRKHVHLDEGDVCSSCSLRNSCERAYLLTNKEDEARTIDVMRVLLTYGF
HSMNGSVINESVIKQKSVKNVVRKLLHEVVKLSAVPIDPNLPPPVIKKPPPKVKQPPPPP
KKRVGRDDIEMKKGDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYR
RNMACFHCDCKRPPDAFLESKVQEMQPGPRTRLEKVAHRPEVSNAWNFDFDDDESDGADV
AAFEYADSPVMSEASPLDNQTHGGKFRGLEDDFDTAGRSSRVHERKYSDIDSSKHGMGFD
DFDDEDDIDSYEIDTHRNNPRQKASYSDNEVFSEPEDIKGSNNSSPARRGTRFPSHSKSS
KHMHKNVALSGSEDDELDFDSDEELSVHPKWKSSHVADSKHRGRGASKDLSFGSDEDLDL
DSDGDDGFGNFRSKGRRQEKRSYGRGNFQRGGSSNFEGGSFSDLEGPHSRRNGSRGSKTG
SGRRGNNVRHPGDYNFRKDSRSWSNTKMDDGRNYPGDHFDKSYRGSRGDKGRLREDDYRR
QRKDNNMQKFKGPRQYGVFENRRRGRSHEYSIGSDDPSEFRNSRRVIER
NT seq
8790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcgcagccggattcgaacgttttcagcgttcgaatcgtgtccatcgatcat
tacatggcacggcccatctccggctacgatacttgctatagtagctttcaaggtgaaaga
gtgaatgaagttccggttataagaatttatggttccacaccggctggtcagaagacttgt
ttgcatattcatagagccttgccttatttatatgttccattggtggatatattacctcag
ggctctcatacacaccaagaagaccacgcatgcgcagatgccttagcacttgccttagaa
aaagccttgaagcttaaagttggtgctggttcaaaacggcagcatgtgcatggttgcagc
cttgtacgagcaaagaagttttatggttatcgttcatctgaggagctatttgtgaagatt
tatctctactatccacatgatgtctctcgtgcagccaatcttcttttggcaggtgctgtt
ctggataaaagtttgcagcctcatgaatcgcacattccgtttattcttcagtttcttgtt
gattataacttgtacgggatgggtcatcttcatttatcaaggatgaagtttcgtaatcca
atacctgatctttcccatcccagaaaaattaataattgtggccaacatgggcagaagatg
gatgacttgaccttgaaggctgctggttttcaggcagattcaagtcgtgatgtgtgcata
aattcgccagtttggatatcttccacgattccaggtgaatggatgtggcacgtttcagct
gaacttgatgtgtcatcagatcaagacatttgccatgttaaacgtcaaagtttatgtgaa
cttgagggagatgccaccctagatgacattcttaaccagcaattcaaaatatatacatct
ctatcccaaacctgttccgatgtgaaaatggttcagtctcttattccaatttgggaggaa
gagtgtgagaggacagggatgcatgagatggctctaccttcttaccctgacaggccactt
tcagaagatgttttgaaagctctctcacttggtgttggatttgaggacgaactaatgaaa
ttgtgcagcaaagttgaagaaactttgtctcacaatgaattgggatttgaacagtcagtc
ataccttcggccaatgaagaaaatttggttggacctacacatatcaatttgaatcatact
gttccacaagctctgagttgctcgaaagaacaaagcctgcttgggtctctgtcacaacat
tgtaagccatgtgaaaaagagatgaatgctgcctcatctgaaaaaaaagatgtttgtcct
gaacttttgtctgttggtgaaatactatcatcacaaacagctacagataccgaagctttg
gggctgttagcatggcttgccaattctcatgctgctgatgatataaactcagatgatgaa
cttgttcgtgagactatattgactcctttgttgcctgcaacaaccattgataaggtgcta
gagaaagccagtatcgattatgagagtgagtcacagaaagaatgtcaggatattcttgat
tcggttggggatttaattgaatttgatggtctgaaggaaagaaattctcattcttatgat
catattcaaatctcatccggcaaacatattccccaaacagatggttccagtgatgatcta
ggtctatcaccttctgcaggatcagttgcaaattcatcaaaagcagacatgaaaactgaa
ttgaagaggtcctcccaggataccagtaaaacatttagtaccaagcgcaaaagaaaaaaa
cttttatggggttctttacctctttctgtgactgggaaggggaaggataactctgatagt
gtcagtttcaacataactgaagcatgtgctgatgaaattaaagaatgtttaggcacaagt
ttttcagctgaaaatgatttgggaaaagcttctgaccctttaaataaaaatgcacatgcc
agtgatgataaacaagaagcaggtatattggttgaatgcactgtgcgggacttgatgaga
agaaagcgaagccgccgaattgaacctgctgattgtgggtctgttaggagtgaaaatgtt
catttgaagatggaaaagggaaaagatagtttcttttgcccaaaacaattgaattttcat
gggtcacataatgagcttgacaagaagggccctggatctctcaaccatagtccatcactt
gccaatgaacaaaaggaatttcctgaagctgttggtttcaagcctacccattctgattcg
gtgtattgtactctaccccaattgtctggcatttctaatccagcacaggctaacacaggc
catcctgaacaaatggggaagaagttagcgttgaacttttaccccaagaagcatgactct
gcaatttctattggtcactgtgaaacttataagggtaaagagtttgactttcgagtaact
tctgcagaatcccgaaattctgatgcccacacttccaaagcccacaaggaaatagattct
cctgatgagagattacagcaaacagacactaatggttcttggtgtttgtcagcttctcca
cgtacgcataaaatgcttgggatggatggttacatccacgaaacttattatgaaggtgaa
atttccttatctgctgacaaacctgtgggcatagatgcaacgactgacaaaagttatcca
cagaatgaagattgtggtggtggaaaacagggttgcattactggcttggttgttgatgtg
gaggcaaaacctgtggagttgattggcatgaccttctgcaagaaacccccaacggcagat
tggaatgatggagcaactgaaaatgttacacatttacctactacccaacattctccttct
ctttttaatgaggaaaattgtcaaggaacatcagggagagctttggatgaggttctccca
tttttctcaagggggtgcgaagaagagaaggaagttcaaaacaagtgcctaggaaataac
aactctaattttcatcaggaagctgcgttgggagtccctattcactatcaaaatgatggc
tctttcttgtacctgttaacgcctgtatcttcacccccttctccagattctgtatatagg
tggctgtcatgtgatgaagaaggaagtcatagacagagtaatgcagtatcagcagagtct
ccatctttaacaggctctaccgagtgtctgattgcttcagaaaactcttctcctgttaat
tgtaatgaggctttgaccaaatctagttctaaatatcacatgacatcaatgttggaacaa
gggcatccagagaagaatatggtccttggttcagaagtgaagtcttgcagtaatgagtcg
agaacaccctgtcaaagtgaggaaaatattaggacagtcaatgcatgtgctgatggctca
caggatatgtctcagatatcaggcccagatggaaaatccaggcccactccactaagtcaa
ataggatttcgtgatcctgcaagtgttggtgctgggcaacagcttacattgttaagcttg
gaggttcacacagaatctagaggagaccttcgacctgatcctcgattcgacgctgtcaat
gttgtagctctagcaattcagaatgacaatgattctgaaactgaagttcatgtgctgttg
tatagtaaaactggattctatcagaggaatcttgatggaatatttgggcttaaggttttt
gttttctctgaggagaagcacttatttggtcagtttatgaagattttatgttctcttgat
cctgatattttaatgggttgggatgtgcaaggtggttctcttggttttctagctgaaaga
gctgcatatcttggtataggattgcttaacaaaatatcaaggacaccatctgaaaccaag
ataaaagctgaagaaactaatatttctcaaaagggttcacaggaagaactgctgtctaag
ccattgattgctgattctattgtgatggaagatgcaataatagaggatgaatggggccga
actcatgccagtggtgtccatgttggtggtagaattgtcctcaatgtctggcggttaatg
cgtggtgaggttaaacttaacatgtatacagttgaagctgtagctgaatctgttttgagg
caaaaaattccatcaattccttataaagtattgacaaaatggttttcaagcggtcctgca
caggcaaggtacagatgtgttgaatacgtggttgaaagagcaaagctgaatctgcagata
atgaataaactggatatgataaatcgaacatcagaacttgctcgtgtttttggcatcgac
ttcttttctgtcctctctcgaggttcacagtttcgtgttgaatccatgtttctgaggttg
gcacatacacagaattatcttgctatttctcctggaaaccaacaggttgcttctcaacct
gcaatggagtgtttgcctcttgtgatggaacctgaatctggtttctatgcagatccagtt
gttgtgttggactttcagtctctttatccatccatgataattgcttacaacctttgcttt
tgcacatgccttggaaaaattgcaaattctaaagtaaatacccttggggttagttcatat
gcaccagatccaaatgttttgcggaatctaaaagatcaagtgctgcttactccaaatggt
gttatgtatgtgccttcaaaggtacgcaaaggagtgctgcctagattactggaggaaatt
ttatcaactcgaataatggtgaaacaagcaatgaagaagttgactccttcacagcaagtt
cttcagaggatattcaatgcaagacagcttgctctgaagctgatagcaaatgtaacgtat
ggctatactgctgctgggtttagtggtcgcatgccttgtgctgagcttgcggacagtatt
gttcaatgtggtcgtagtacacttgaaaaagctatttcttatgtaaatgcacatgaaaaa
tggagggctaatgttatatatggtgacactgatagcatgtttgtcctccttaaggggcgc
acagttaaagaatcattcaaaataggacatgagattgcatctgcaataactgcaatgaac
ccaaatccagttacgttgaagatggagaaagtctatcacccatgttttctccttactaag
aagcgctatgttggctatagttatgagagccctgaccaagtcaaacctgtttttgatgct
aaaggcattgagacagttcgcagggatacttgtggtgctgttgccaagacaatggaacag
tcactaagactcttttttgaacatcaggatataccaaaggttaaagcatatttgcatcgt
caatggacaaggattttgtctggcagggtgtctcttcaggattttgtttttgcaaaagaa
gttcgcttaggaacatacagtacaaaagtaggttcactcccaccagcagcaattgtggca
actaaagcgatgagagcagatctgagggcagaaccacgctatgcagagcgagtaccctat
gttgtaatccatggagagcctggggctcgcctggttgacatggtggtggatccattggaa
cttttagctattaattccccatacagattaaatgatttgtactacatcaacaaacagata
atcccagcactgcagagggtatttgggctagttggtgctgacttgaaccggtggttctca
gaaatgccgcgcctagccagggaagcttttggtaaatgcggtgtacatgctctaaatcca
cagcggactagaattgattattattatctttcaaaacactgtatactctgcggtgacctg
gtccaagcatcagcccatctatgtggtaaatgttcagaaaacgaaactgcagctgcaaca
gctattgttgggaggacttcaaaatcagagagagagatgcaacaccttgtcgctatatgt
cggcactgtgggggaggggactggcttgtggagagtggggtgaagtgcaattcacttgcg
tgctcggtcttctacgagagacgtaaagttcagaaggaactacagggtctttctgccgtt
gccaccgataaaggcttgtacccgaaatgtatgtttaactcttccctaactctctttgaa
ccccgacggaaaaaaaaaatggcacaatctccattcactctccttctcctgaaacgcctt
tctctctcttccaaaatccccctaaaactcaacaacttttctccctctccaattttcacc
accactaaatcaaagcccttctcttctgcttcaccgcagccggcggtctccaccactcaa
gacccaccgaaaccaacctctctctcggctcgcatgagcttcgtttttgaccaaattgat
caaattgaaagacagagacaacaacaatcggtccagtacgacgacaccctccaacgtatc
cgagcttggcgccaatcaaaaaaggaagctcaagcaacccaacagcaatttcaacccaaa
gaacaaagcccagaatctggaattgccaaaaatgatgccagtactactgactttactttg
tctgactcgcccgagttaaccgagtcacgaaacggggatgccctccggcggattcgtgct
tggagggaatcgaagcatgtggagaacaaggaatgctcagaaggtgaaaccgctaaaaat
gaggctaactccagtgttttttgtactgatccagtggctgagttgggcgagttggagagg
cagaagggcaatgaggtggagttggtgcacccatggccggagtggatagagttgatggag
agattagtgcagcagaattactttgatcataaaaggagagatgagggaaagatggtggaa
gagttgggatttgacttgagtaatgttgttgaggaagttaaggataatgctggaattgat
tttaaagacttcaggactgtgcaaactgcttgtcttaattttgggaaggaccggtttgat
atattgaggtcattgtcaagacaggatgtccaaaatttggttggttttggatgcccaagt
gcagacaagaaggtggtgttctctgcaaaactcttgaggaaacatgttcacctcgatgaa
ggagatgtttgtagttcctgcagtttgaggaattcttgcgagagagcatatcttttaaca
aacaaagaggatgaggcacgaactattgatgttatgcgtgtcctattgacctatggtttt
cattctatgaatgggtcagtcatcaatgagtctgttattaaacagaagtctgtaaagaat
gttgttcgtaagttgcttcatgaggttgtaaagttgagtgctgttcctatagacccaaat
cttccccctccagtgataaagaagcctccaccaaaagtgaagcaacctccacctcctccg
aagaaacgagttgggcgtgatgacattgagatgaaaaagggggattggctttgtcccaag
tgcgatttcatgaattttgcaaagaatacagtctgtctacagtgtgatgctaagcggcct
aagagacagctgcttcctggggaatgggaatgccccgagtgcaatttcttaaattatagg
agaaatatggcatgttttcattgtgattgcaagcgtccacctgatgcgtttttggagagt
aaagtacaagaaatgcaacctggtccaagaacaaggttggagaaggttgcccacagacca
gaggtctctaatgcctggaattttgactttgatgatgatgaatcagacggggcagatgtt
gctgcctttgagtatgcagattctccagtaatgagtgaagcttctcctttggacaaccag
acccatggagggaagtttagagggcttgaagatgattttgatacagctggccgatcctca
agggttcatgaaagaaagtattcagacatagatagcagcaaacatggaatgggttttgat
gatttcgatgatgaagatgacattgacagttatgagatagacactcatcgaaataatcca
aggcagaaagcttcttactctgacaatgaggtgttttctgaaccagaagatatcaagggc
tctaataatagttctcctgctcgtcgagggacaaggtttccttctcatagtaagtcatct
aagcacatgcataaaaatgtagctttatcaggttctgaagatgatgagctagattttgat
tccgatgaagagctttcagttcatcctaaatggaaatcgagtcatgtagctgactcaaag
catagaggtagaggtgcatcaaaggacttaagctttggctcagacgaagaccttgatttg
gattccgatggtgatgatggttttggcaattttagatctaaagggaggagacaggagaaa
cggagttatggtcgaggcaattttcagagaggaggaagttccaattttgaaggtggttcc
ttctctgatttagaaggtccacattccaggagaaatgggtcaagagggagtaaaacagga
tctggcagaagaggaaataatgttcgccaccctggtgattataacttcaggaaagattca
cgatcttggtccaacaccaagatggatgatggaaggaactatcccggtgatcatttcgat
aaatcatatcgagggtctcgaggtgataaagggaggcttcgagaggatgactataggagg
cagagaaaggataacaacatgcagaaattcaagggacctaggcaatatggagtatttgaa
aataggcgccgtggaagatctcatgaatatagtataggcagtgatgatcctagtgaattt
agaaacagtaggcgtgttattgaaagataa
DBGET
integrated database retrieval system
