Theobroma cacao (cacao): 18600580
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Entry
18600580 CDS
T02994
Name
(RefSeq) RING finger protein B
KO
K20285
Rab9 effector protein with kelch motifs
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18600580
Membrane trafficking [BR:
tcc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
18600580
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
18600580
NCBI-ProteinID:
XP_007031166
UniProt:
A0AB32V6U3
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Position
5:complement(38897242..38901418)
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AA seq
650 aa
AA seq
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MGSLGAETAKKKAMWLYPKVSGFNPSERWGHSACYSNGVVYVFGGCCGGLHFGDVLMLNL
NTMVWNTLVTVGQGPGPRDSHSAVLVGTKMMVFGGTNGSKKVNDLHVLDLASKEWIRPQC
NGAAPSPRESHTATLIGEDKVVIFGGSGEGEANYLNDLYVLDLRTMRWTSPQVRGHIPVP
RDSHSAVAIGNKLVVYGGDCGDRYHGDVDVFDMDTSTWSRLAVQGSLPGVRAGHAAVNIG
TKVLIIGGVGDKHYYNDVWVLDVNACSWAQLDICGQQPQGRFSHTAVFSESDIAIYGGCG
EDERPINELLVLQLGAQHPNGRYNISMCKTFGSHWNQEKRRFLRVAPNNLKTFYFGDNDS
VRQGAHEPAQEAKHSSQLNSDTSNPKRRRTANSKAWEVESEQEEHSLSLSQHSSPSQSDQ
EQAPAQKPTDSTGSEGLNLFKQFHHIPNNFQPNNVPNNHKETRYMVHKTQQDLQFIREHQ
NLQKPEQYLHVVHPGRQGTQYLAGEQKHLDAGPTHNLLGAEVRGKVDAAFDSGFLMTATV
NGKIFRGVLFAPGLGVISRGPMHAQSPASTSQVAAAAQPYLSSSNSEPYKSSQPPTMRIV
PESGHSSRTAQVNRPNSVTRATSSAAKDPKLRSDLRDVVLTLGGPGTSHV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggggtctctcggagctgaaactgcaaagaagaaagcaatgtggctgtatccaaaagtt
tcaggttttaatccttctgagagatgggggcattctgcctgctattccaatggggttgtt
tatgtttttggggggtgttgcggaggtctacattttggtgatgttctcatgctaaatctc
aacacaatggtttggaacactctcgtgaccgtagggcagggtcctggccctagagacagc
cacagtgctgttcttgtggggactaaaatgatggtgttcgggggcactaatggttctaag
aaggtgaatgatcttcatgttctggaccttgcatcgaaagagtggattcgacctcaatgc
aatggtgctgcaccttctcctcgtgaaagtcatactgccacgctgattggtgaggataag
gtagtgatttttggaggaagtggggaaggtgaagcaaattacttgaatgatttgtatgtt
ctggatcttaggactatgagatggacttctcctcaggtgagaggtcatatcccggtccct
agagacagtcacagtgctgttgcaatagggaacaagcttgttgtgtatggtggggactgt
ggtgatcgatatcatggagatgttgacgtgtttgacatggacacttcaacttggtcaagg
ttggctgttcaaggctctttaccaggtgttagagcaggtcatgctgctgtgaatattgga
acaaaggttttaattattggaggggtgggagacaaacactactacaatgatgtttgggta
ctagatgtgaatgcttgttcttgggctcagctagatatatgcggccagcagcctcaaggg
cggttttctcatacagctgttttctcagaatcagatattgctatctatggagggtgtggg
gaggatgagcgtccaatcaatgagttactggttttacaacttggagcacagcatccaaat
ggtcgttataacatttccatgtgcaaaacttttggaagccattggaaccaagaaaagaga
agattcctaagagtagcaccaaataacttgaaaactttctattttggggataatgactca
gtaagacagggagctcatgaaccagcacaagaagcaaagcactcttctcagttaaattca
gatacttcaaacccaaagaggagaagaactgccaattcaaaggcatgggaggttgagtca
gagcaagaggaacattccctttcgctctcgcagcattcatctccttcacaatctgatcaa
gaacaagccccagcacaaaaacccacagattccacagggtctgaaggactaaacctgttt
aagcagttccatcatattccaaacaattttcagccaaacaatgttccaaataaccataag
gagaccagatatatggtacacaaaactcaacaagatctgcagtttataagagaacatcaa
aaccttcaaaaaccagaacaatatcttcatgttgttcatcctggcagacaaggaacacaa
tacctggctggggaacagaaacacttagatgcagggcctactcacaatctgcttggtgct
gaagttcgtggtaaagttgatgcagcctttgactcgggtttcctgatgacagcaactgtt
aatgggaagatattcagaggggtcttatttgcacctgggctgggggtcatctctagaggg
ccaatgcatgctcaaagtcctgcatcaacaagccaggttgctgctgctgctcagccatat
ctaagctcaagcaattcagagccctacaagtcctcccagccaccaacaatgcgcattgtg
cctgaatccggtcatagctctcgaacagctcaggtaaacagaccgaattcggtcaccaga
gctacttcatctgcagcaaaggatccaaagctaagaagtgatcttagagatgtggttctg
acactaggaggacctggaactagtcatgtctga
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