KEGG   Theobroma cacao (cacao): 18600652
Entry
18600652          CDS       T02994                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03030  DNA replication
tcc03410  Base excision repair
tcc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18600652
   03410 Base excision repair
    18600652
   03450 Non-homologous end-joining
    18600652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcc03032]
    18600652
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18600652
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcc04147]
    18600652
DNA replication proteins [BR:tcc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    18600652
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     18600652
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     18600652
Exosome [BR:tcc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18600652
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N PM2_P3
Other DBs
NCBI-GeneID: 18600652
NCBI-ProteinID: XP_007031291
UniProt: A0A061F4G6
LinkDB
Position
5:39222195..39228685
AA seq 383 aa
MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFTRTIRLLEAGIKPVYVFDGQPPDLKKQELAKRYSKRADATEDLQQAMEAGN
KEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEASSEAEAQCAALCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKVPVMEFEVAKVLEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIEHILQNINKERYSIPDDWPYQEARQLFQEPLVCTDDEQLEMKW
NAPDDEGLITFLVNENGFNGDRVTKAIEKIKAAKNKSSQGRLESFFKPVGNTSIPIKRKE
TPQNIPKETTNKKLKAGGGKKKK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgggcatcaagggtttaacgaagcttctagcggacaatgcacccaaggccatgaaggaa
cagaaattcgagagctttttcggccgcaagatcgccatcgacgccagcatgagcatttac
cagtttctcattgtggtgggtcgtagtgggactgaaatgctcaccaatgaagcgggtgag
gtcaccagtcatctgcagggcatgtttactcgtacaattcggcttctcgaagctgggatc
aaacctgtctatgtttttgacggtcagcctcctgatttgaagaaacaagagcttgcaaaa
cgttactcaaagagggcagatgctactgaggatttgcaacaagccatggaggctggcaat
aaggaggacattgaaaaattcagcaagcggacagtaaaggtgacaaagcagcacaatgaa
gactgtaaacggcttttaagacttatgggggtacctgtgatcgaggcttcttctgaagca
gaggcgcaatgtgctgcactttgcaaatcaggaaaggtttatgctgtggcttctgaggat
atggattctttaacctttggagctcctagatttcttcgccatttaatggaccctagctca
agaaaagttccggtcatggagtttgaagttgcaaaggttttggaggagctgaatcttacc
atggatcaattcattgacttgtgcattctttctggctgtgattattgtgacagcattcga
ggtattgggggacagacagctttgaagttaattcgtcaacatgggtctatagagcatatt
cttcagaacataaacaaagagaggtactcaatacctgatgattggccatatcaagaggct
cgacagctttttcaagaaccattagtctgcactgatgatgagcaacttgagatgaagtgg
aatgctccagatgacgaagggttgataacctttctggtgaatgaaaatgggttcaacggt
gacagagtgacaaaggcaatagaaaaaattaaagcagccaagaacaagtcatcgcagggc
cgattagagtcattttttaagccagttggtaacacatctataccaattaaacggaaggaa
acaccacagaacattcctaaagaaactactaacaaaaagttgaaggctggtgggggtaag
aaaaagaagtaa

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