Theobroma cacao (cacao): 18600661
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Entry
18600661 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
tcc
Theobroma cacao (cacao)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
AAA_30
zf-CCHC_2
ERCC3_RAD25_C
YgbB
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
18600661
NCBI-ProteinID:
XP_017976895
UniProt:
A0AB32WDK5
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Position
5:39309846..39317351
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AA seq
742 aa
AA seq
DB search
MASLVGLSSSIHHTPSLDTFSISNRRITSITAAASCLPLPFTDKAQFNALVVAGRPLLSF
KHSFVPRAVATPNSVLSEQAFKGLSLHQDQDGQDVYEAAASSNHDDELDISKLGLPQRLV
DSLLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSP
RRMSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVV
GTPGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATM
PSWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAISTTSTAKRTILSDLITVYAKGGK
TIVFTQTKRDADDVSIALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG
LDIPNVELVIHYELPNDAETFVHRSGRTGRAGKEGSAILMFTNSQRRTVRSLERDVGCKF
EFISAPAIEEVLESSAEQIVATLNGVHPHSIEFFTPTAQRLIEEEGINALAAALAHLSGF
SRPPSSRSLISHEQGLVTLQLTRDSSYSRGFLSARSVTGFLSDVYPVAADEVGKVYLIAD
ERVQGAVFDLPEEIAKELLNKQTPPGNTISKITKLPPLQDDGPSSDYYGKFSSRDRSPRG
ISKDRRGFRGSRSWSSGRNSDDEVRGGRSSWSRTSKSSRDDWLIGSRRSKRSSSHDRSFG
GSCFNCGRPGHRASDCPEKLDF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttagtaggactttcgtcctccatacaccacaccccgtctctagacactttc
tccatctctaatagaaggataacatcgattacagcagcagcttcttgcttgcccttacca
ttcactgataaggctcagttcaacgccctcgtagtagctggaaggccattgctcagcttc
aagcactcttttgttcctcgcgctgtggccactcccaattccgtgctcagcgaacaggcc
ttcaagggcctctctcttcaccaagaccaagacggccaggacgtctatgaggctgcggct
tcctccaaccacgacgacgaacttgacatttccaagttgggtttgcctcaacgcctcgtc
gattccctactccagcgaggcatcactcaccttttcccaattcagagagctgtctttgta
ccggcattacaaggtcgagacatcattgctcgtgcgaagactggaactggcaagacatta
gcctttgggatccccataatcaaacgccttactcatgatgctccccaacaaacaagtccg
cggcggatgtctggtcggcttcccagagttttggtcttggcccctactcgggagttagcc
aagcaagtggagaaggaaattaaagagtctgctccttacttaaatactgtttgtgtttat
ggaggggtatcgtataatacacagcgaaatgctctttcccgtggggttgatgtagtggtt
gggactcctggtcgaatcattgacctcatagaaagtagtgacctcaaattgggggaagtt
gaatatcttgtccttgatgaagccgatcagatgcttgcagttggatttgaggaagatgtc
gaagaaattttagagaatcttccatcaaagaggcagagcatgcttttctctgcaacgatg
ccttcttgggttaaaaagttggcaagaaaatacttggataatcctctgaatattgacttg
gttggagatcaagatgaaaagcttgctgaagggatcaaactttatgcaatatcaaccaca
tcaactgcaaagcggaccattcttagtgatcttataacagtttatgcgaaaggtgggaag
acaattgtttttacacaaacaaaacgagatgctgatgatgtttctattgccttaacaaac
agcatagcttccgaggcattgcatggtgatatatctcaacatcaaagggagagaacattg
aatggttttcggcaaggaaaatttactgtgcttgttgccactgatgttgcatctcgtgga
cttgatattccaaatgttgagctagtcatccactatgagcttcctaatgatgcagagact
tttgtgcatcgctctggacgtactggacgggcagggaaggaaggttctgcaattttgatg
tttactaatagccaaaggagaactgtccgatcccttgaacgtgatgtcgggtgtaagttt
gagttcattagtgctccagctatcgaagaagttctggagtcatcagctgagcaaattgtt
gctactcttaatggagttcatcctcactctatagagttctttactccgactgctcaaaga
ctgattgaagaagaagggataaatgctcttgctgcagcactagcacacctgagtggattt
tcccgccctccttcatcgcgctctcttattagtcatgaacagggattggtaacactgcaa
ttgacaagagattcatcttattctagaggtttcctgtctgccaggtctgtcactgggttt
ctttctgatgtttaccctgtggcagctgatgaagtggggaaagtatatctaatcgcagat
gagagggttcaaggtgcagtgtttgatctcccagaggagattgctaaagagttgctgaat
aagcaaacaccacctgggaacacaatctcaaagatcacaaagttgcctcctttgcaagat
gatggcccttcaagtgattattatggaaaattttctagcagggatcgctctccacgggga
atatctaaggatcggagaggttttagaggctccaggagttggagcagtggccgaaactct
gatgatgaggtccgaggtggaagaagtagctggtctcggacttcaaaaagcagtagggat
gactggctaattggtagtagaagatcaaaaaggtcatcatcccatgacagaagctttgga
ggttcatgtttcaactgtggacgtcctgggcatagggcatcagactgccctgagaagcta
gacttttag
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