Theobroma cacao (cacao): 18600805
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Entry
18600805 CDS
T02994
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18600805
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18600805
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
18600805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
IMS_HHH_1
AAA_22
HHH
Motif
Other DBs
NCBI-GeneID:
18600805
NCBI-ProteinID:
XP_017974121
UniProt:
A0AB32W5T2
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Position
4:complement(865051..872561)
Genome browser
AA seq
1233 aa
AA seq
DB search
MDSCSLKSVFDLPALFRSIFSFRYFNSLQSECFPVCFLSDVNMVISAPTGSGKTVLFELC
ILRLLSRFITGDGRFVHIKGTLKTIYIAPSKALVQEKLRDWNQKFGSLGINCLELTGDNE
SYSIRNIQEADIIVTTPEKFDAVTRYRIKDGGLSFFSDIALLLIDEVHLLNDLRGAALEA
IVSRIKMLARNPEMKSSPLASVRFLAVSATIPNIEDLAEWLEVPVQGIKRFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIFDILMQFSRGKSALVFCSTRKGAQEAAQRLSQTVMT
LGYSNPFIRSHEQQERLREASLSCSDKQMQSYILYGVGYHNGGLSLKDRNLIESLFLSGD
VQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSMVLQMCGRAGRPPFDETG
MVVIMTRRETVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTISDITKAIEWMKCSYL
YVRMKKNPENYAVRKGIPRDRIEKHMQEICVKNVNELSYHQMIQTDEDGFVLKPQEPGRL
MTKYYLKFNTMKHIMQAQPSYSLEDVLQIISCAVEIAWIQLRRSEKKLLNDINADKDGRL
RFHVSGDKGKRKKRIQTREEKIFVLANDCLTGDPLVHDLSMTQDANSICSNGCRIAKCMK
EYFIYKKNYKGALNSSLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGIKSFETLA
EADPRRIELVTGRKYPFGNHIKESLTSLPPKVDIKIEESECQRQGKSKLAVTLTRLSQGV
QSTKRHYADMIVASEEENLILFHEKIRMDDFLSPYSTTILVANPLGKMTVKADLIFEEHI
GVDLHEKLLLVNESNSYANNKRAKEQPQFFAPPEEVYVVEDDNAATNQTLAQEPPDSIES
KRESSLMPSFNLLDEELGEGEPAAETEKDDCEITIGHTIFDHIREKAKSFPLLTPSNSAY
PPTSGGLILTSKRSRDQPPEEMERSKTHQHIVLDPSPESREPEQNVHGINSYMTRKYHIN
SGSSVTIDLTDESGDLPSEPEVLSFKTLTEETIFDHIRKKSRNFPVLNTLNPIESDSFFR
TDEYFAVNQRGFCNATSRTSNDSNSSNVVRDAMVISELEPGEVNIDVCETKAGTKAKNNV
FHGSSSGANGKSAVSPKVSSTNAGISSIKMLTFDISMVKNSKRLADLGSCIEDGSKELRS
PIESKRPCCSVASTGKVSEVDSFLGFQSVFSFL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggattcatgttcactgaaatccgtgttcgatttgccagcacttttccgttcaattttt
agtttcaggtactttaattcactgcagagtgaatgcttccctgtttgtttcctctccgat
gtaaacatggttatttcagctcctactggaagtgggaaaactgtgctctttgagctctgc
attttgaggcttctgtcaaggtttatcactggggatggaaggtttgtccatataaaggga
acactaaaaacaatctacatagccccatctaaagctttagtacaagagaagctgcgtgat
tggaatcagaagtttggttcactggggataaattgcctggagttgacaggtgataacgaa
tcttatagcataaggaatattcaagaagcggatattattgtaacgactcctgagaaattt
gatgctgttacccggtaccgcataaaggatggaggcttgagcttcttcagtgatatagca
cttctgcttattgatgaagttcacctactgaatgatctgcgtggggcagctttggaggca
atagttagcagaataaaaatgcttgctcgcaacccggaaatgaaatcaagtcctctggca
tctgttcggtttttagctgtgtcagccactattccaaatattgaggaccttgctgaatgg
cttgaggtccctgtccaaggaatcaaaaggtttggagaagaaatgaggcctgtaaagttg
accactaaagtttttgggtatgccgctgccaaaaatgacttcctattcgaaaagcgcctc
caaaactatatttttgatattctaatgcaattttcaaggggaaaatctgctctagttttt
tgctcaactagaaaaggagcacaagaagcagcacaacgcctctcccagacagtaatgacc
ttaggttattcaaatccatttattagaagtcatgaacaacaggaaaggctaagagaggct
tccctgtcatgcagtgacaaacaaatgcaatcttatattctttatggagttggttatcat
aatggtgggcttagtcttaaggatcgtaatctcattgaaagtctttttcttagtggtgat
gtccaagttctgtgcaccacaaatactcttgcccatggaatcaacctaccagctcataca
gttgtaattaagtcaacacaacatttcaacaaggaaaaaggtctttacatggaatatgat
cggtcaatggtactacagatgtgtgggagagcaggtcggccaccatttgatgagacgggg
atggtggtaatcatgactagaagagaaacagtccatttatatgagaatctcttgaatgga
tgtgaaatggtagaatcacagttgctctcatgtctgacagaacacttaactgcagaaata
gttcaactgaccatctctgatatcacaaaggcaattgagtggatgaagtgctcatactta
tatgtgagaatgaaaaagaatcctgagaattatgcagttagaaaagggattccaagagat
cgaatagagaagcatatgcaagagatttgtgttaaaaatgttaatgagctatcataccac
caaatgattcagactgatgaagatggtttcgtattgaagccacaagagccaggtagattg
atgacaaagtactatctgaaatttaacaccatgaaacacattatgcaagctcaacctagc
tatagtttagaagatgtactacagattatatcctgtgctgtggagattgcttggatacag
ctcagacgcagtgagaagaaacttttgaatgacataaatgccgataaagatggccgcctc
cggtttcatgtcagtggtgataaagggaaacggaaaaagcgcattcaaacaagagaagag
aagatatttgtgttggcaaatgactgcttaaccggggatcctttggttcatgatttatct
atgacccaggatgcaaattcaatatgctcaaatgggtgtaggattgctaagtgtatgaaa
gagtattttatatacaaaaagaactataaaggagccctcaactcgtcgcttctagcaaag
tcattatatcaaaaactctgggatgacagtccttacttgctgaaacaattacctggcatt
ggaatggtgacagcgaaggcactgcattcaatgggaattaaatcatttgagacactagct
gaagctgatccaaggaggatagagttggttactgggcgaaaatatccttttggaaatcat
atcaaggagtctctaacgtcattgccacctaaagttgacattaagattgaggagagtgaa
tgccagaggcaaggaaagtccaagttagcagtaacattgacgaggttatcacaaggtgtc
caatcaactaagcgacactatgctgatatgattgttgcttcagaagaagaaaacctgatc
ctttttcatgagaagataagaatggatgactttttaagcccctatagcacgactatcctc
gtggcaaaccccctgggaaagatgactgtaaaggctgatcttatatttgaagaacacatt
ggcgttgatctccatgaaaaacttctgctggttaacgagagcaattcatatgcgaataat
aaacgtgcaaaggagcagcctcagttttttgctccacctgaggaagtttatgttgtggaa
gatgacaatgcagccacaaatcaaactttggctcaagaacctcctgattcaattgaatct
aaaagggaaagctctttaatgcccagtttcaacctcttggatgaagaattgggagaagga
gagcctgctgctgaaactgaaaaagacgattgcgaaatcaccattgggcatacaatattt
gaccatatacgtgaaaaagccaagagcttccctctgttgactccatcaaacagtgcctat
cccccaacatctggtggcttaattctgacaagcaagcgctctcgcgaccagcccccggaa
gaaatggagagaagcaaaactcatcaacatattgtgctcgatccttctccagaatccaga
gagccagaacagaacgtccatggtatcaacagctacatgaccagaaagtatcatataaat
tctgggagctcagttaccattgatctcacggatgagtcaggtgatcttccatctgaacct
gaagtcctctcgttcaaaacgttgactgaagaaacaatatttgatcacatacggaaaaaa
tccaggaattttcctgtgctcaatacgctaaatcccattgagtccgattctttctttcgg
acagatgaatacttcgcagtgaatcagcgagggttttgcaatgctacttcaagaacatca
aatgattcgaattccagcaatgttgtcagggatgcaatggtcatttcagagctggaacct
ggggaagtcaacatagacgtgtgtgagaccaaagccggcacaaaggcgaaaaacaatgta
ttccatggaagttccagtggagcaaatggaaaatcagcagtttctcccaaagtttcaagc
accaacgctggtatatcatctattaaaatgctgacctttgatatttcaatggtgaagaac
agcaagcggctagcagaccttggaagctgtatcgaggatggttcgaaagaactgcgatct
ccaatcgaatccaaaaggccctgctgctcagtggcgtccacaggcaaagtcagtgaagta
gattcattccttggctttcagagtgtcttttcatttctctga
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