KEGG   Theobroma cacao (cacao): 18600824
Entry
18600824          CDS       T02994                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18600824
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     18600824
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd MIOS_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Nup120_160 NBCH_WD40
Other DBs
NCBI-GeneID: 18600824
NCBI-ProteinID: XP_007031566
UniProt: A0AB32V788 A0A061EDJ2
LinkDB
Position
4:complement(990218..994524)
AA seq 512 aa
MQMDSSASQSFFHSVRSRELSSFRVRKRPFIDELASDFTEIGAVAIEHDAVQTPPLAISF
CKASKNSHIFAVSDEDGYVSLFDSRKKLSSAGLHQENAEKARISDWVAHQNAIFDVCWIK
KDTRILTASGDQTIKIWDAQEKKCTGVLMGHTGSVKCLSSHPTNCDLVISGSRDGSFAIW
DLRCKINSKSRCDEVCPPSTSMLKGAHPSTQARRGRRGKAAAASITSVLYLKDGNSVATA
GAADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTASCMDNRIYLYNI
LQLDKGPMQALCGPRIESFYVKSAISPDADHIVSGSSDGNAYIWKVNKPQVEPITLKSHD
GEVTAVDWCPSEIGKVATSADDFTVRIWNIQTSHCSRSRSPSCIRRRVMAIPSAECRKLL
MNENEDPMPLTKDPGSSHSPDEALHQISSSSPSTAPLLSTPKAQKKNISSVSDSNETFEK
TPEGAMKSPSSVLNPPSSLKRKTIRDYFLAAP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgcaaatggattcgtccgcatctcaatctttcttccacagcgtcagatccagagagctc
agtagctttcgagttagaaaacgaccatttattgatgaattagcttcggattttactgaa
atcggagctgtcgccatcgaacatgacgctgtacagacgcctcctttggccatctccttt
tgcaaggcaagtaaaaactcccatatttttgccgtatccgatgaggatggatatgtaagc
ttgtttgattctcgaaagaagctttcttctgctggattgcaccaggaaaatgcagagaaa
gcaagaatcagtgattgggttgcacatcaaaatgccatatttgatgtatgctggatcaag
aaagatacccgtattttaacagcttcaggggatcaaactataaagatatgggatgcacag
gaaaagaaatgcactggagtcttgatggggcacacgggaagtgtaaaatgcttgagttct
catccgactaattgtgatcttgttatctctggttcaagagacgggtcctttgccatctgg
gatctaagatgcaagattaactccaaaagtagatgtgatgaagtctgccctccatcaact
tccatgctcaaaggagctcatccttcaactcaagcaaggcggggtaggcgtggcaaggct
gctgctgcgagcattacgtcagttctttatctcaaagatgggaattccgttgctacggct
ggagcagcggacagtgttgtgaagttctgggacaccagaaatctgaaatctaatgttact
caagcatgtccccacccagagtcttcaactcaaaagggtatatctagcttgtcccaggat
ttgaaaggagtgtttctcacagcatcatgcatggacaacagaatatatttgtataatata
cttcagcttgataagggcccaatgcaagctttatgtggacctcgaatagagtctttttat
gtaaagtcagcaatcagtcctgatgcagatcacatagtcagtggttccagtgacggaaat
gcttatatatggaaggtaaacaagcctcaagtagagcccatcaccttgaaaagtcatgat
ggagaagttacggccgttgattggtgcccatctgagattgggaaggtagcaacttctgca
gatgatttcactgtacggatatggaacattcagaccagccattgttcaaggtcaagatca
ccatcatgcatccgaagaagagtaatggcaattcctagtgcagaatgtagaaaactttta
atgaatgagaatgaagacccaatgcctctaacaaaggaccctggcagttcacattctcca
gacgaagcattgcaccaaattagctcatctagtccttccactgcacctttacttagtact
cccaaagcccagaagaaaaacatctcatctgtttcagattcaaatgaaacctttgagaag
acacccgaaggtgcaatgaaaagtccatcttctgtgttaaatcctccatcctctttgaaa
aggaaaaccatccgagattactttctagcagctccatga

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