Theobroma cacao (cacao): 18600824
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Entry
18600824 CDS
T02994
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18600824
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18600824
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
MIOS_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Nup120_160
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
18600824
NCBI-ProteinID:
XP_007031566
UniProt:
A0AB32V788
A0A061EDJ2
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Position
4:complement(990218..994524)
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AA seq
512 aa
AA seq
DB search
MQMDSSASQSFFHSVRSRELSSFRVRKRPFIDELASDFTEIGAVAIEHDAVQTPPLAISF
CKASKNSHIFAVSDEDGYVSLFDSRKKLSSAGLHQENAEKARISDWVAHQNAIFDVCWIK
KDTRILTASGDQTIKIWDAQEKKCTGVLMGHTGSVKCLSSHPTNCDLVISGSRDGSFAIW
DLRCKINSKSRCDEVCPPSTSMLKGAHPSTQARRGRRGKAAAASITSVLYLKDGNSVATA
GAADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTASCMDNRIYLYNI
LQLDKGPMQALCGPRIESFYVKSAISPDADHIVSGSSDGNAYIWKVNKPQVEPITLKSHD
GEVTAVDWCPSEIGKVATSADDFTVRIWNIQTSHCSRSRSPSCIRRRVMAIPSAECRKLL
MNENEDPMPLTKDPGSSHSPDEALHQISSSSPSTAPLLSTPKAQKKNISSVSDSNETFEK
TPEGAMKSPSSVLNPPSSLKRKTIRDYFLAAP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggattcgtccgcatctcaatctttcttccacagcgtcagatccagagagctc
agtagctttcgagttagaaaacgaccatttattgatgaattagcttcggattttactgaa
atcggagctgtcgccatcgaacatgacgctgtacagacgcctcctttggccatctccttt
tgcaaggcaagtaaaaactcccatatttttgccgtatccgatgaggatggatatgtaagc
ttgtttgattctcgaaagaagctttcttctgctggattgcaccaggaaaatgcagagaaa
gcaagaatcagtgattgggttgcacatcaaaatgccatatttgatgtatgctggatcaag
aaagatacccgtattttaacagcttcaggggatcaaactataaagatatgggatgcacag
gaaaagaaatgcactggagtcttgatggggcacacgggaagtgtaaaatgcttgagttct
catccgactaattgtgatcttgttatctctggttcaagagacgggtcctttgccatctgg
gatctaagatgcaagattaactccaaaagtagatgtgatgaagtctgccctccatcaact
tccatgctcaaaggagctcatccttcaactcaagcaaggcggggtaggcgtggcaaggct
gctgctgcgagcattacgtcagttctttatctcaaagatgggaattccgttgctacggct
ggagcagcggacagtgttgtgaagttctgggacaccagaaatctgaaatctaatgttact
caagcatgtccccacccagagtcttcaactcaaaagggtatatctagcttgtcccaggat
ttgaaaggagtgtttctcacagcatcatgcatggacaacagaatatatttgtataatata
cttcagcttgataagggcccaatgcaagctttatgtggacctcgaatagagtctttttat
gtaaagtcagcaatcagtcctgatgcagatcacatagtcagtggttccagtgacggaaat
gcttatatatggaaggtaaacaagcctcaagtagagcccatcaccttgaaaagtcatgat
ggagaagttacggccgttgattggtgcccatctgagattgggaaggtagcaacttctgca
gatgatttcactgtacggatatggaacattcagaccagccattgttcaaggtcaagatca
ccatcatgcatccgaagaagagtaatggcaattcctagtgcagaatgtagaaaactttta
atgaatgagaatgaagacccaatgcctctaacaaaggaccctggcagttcacattctcca
gacgaagcattgcaccaaattagctcatctagtccttccactgcacctttacttagtact
cccaaagcccagaagaaaaacatctcatctgtttcagattcaaatgaaacctttgagaag
acacccgaaggtgcaatgaaaagtccatcttctgtgttaaatcctccatcctctttgaaa
aggaaaaccatccgagattactttctagcagctccatga
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