Theobroma cacao (cacao): 18600855
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Entry
18600855 CDS
T02994
Name
(RefSeq) uncharacterized LOC18600855
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18600855
Enzymes [BR:
tcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
18600855
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18600855
Prokaryotic type
18600855
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18600855
NCBI-ProteinID:
XP_017975967
UniProt:
A0AB32W963
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Position
4:1241268..1245500
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AA seq
508 aa
AA seq
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MSLLFLRPKLVSFFTATQSLRLLSSKSNNLNKKLIFSKPLSSIFFSTTSTPYPLQYDMII
NAPTQSQPTPTRRRLSRPDSPNSAEEENPEKELGFDSWVEKKLTLDDEMDKSKRKYYRKR
RKRMYGSDSEDDEKGKNEDGFVELKPKVVEFDRLHEREEELYFYDTFAYPWEKDKHYKMV
YQLEKKYFPDQCFDKAFLEPGKSNEKNKDQGKSKKPGDDKEVEDKGLVFFEEEGNSGKDV
KKEVTEKKVEEFFKCLKKVPYNDTEVSAGEPYLVSRNTELPPRWDGQYGTVVLVNKPKGW
TSFTVCGKLRRLIKVKKVGHAGTLDPMATGLLIVCVGKATKFVERYQGMIKGYSGVFRLG
EATSTWDADSPVIQREPWEHIKDEDIKKTAASFLGEIWQVPPMFSAIKVGGEKMYDKARR
GESIELSPRRISIFHFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTAL
RRDSIGEYSADDAWEFKELEEAITKGYF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcttttcctacggccaaaactcgtctcttttttcacagcaactcagtccctt
cgcctgttgtcatcaaaatccaataatctcaacaaaaaattgatcttttcaaagccactt
tcttctattttcttctccacaacatctactccttacccgctccaatatgatatgatcatc
aatgccccaactcagtcccaacccactccaactcgccgccgactcagtcgaccagactca
cccaactcagctgaggaagagaacccagaaaaagaattgggttttgattcatgggtagaa
aagaaactgactttggatgatgaaatggacaagtctaagcggaaatattatagaaagaga
aggaaaagaatgtatgggtctgattctgaagatgatgaaaaggggaaaaatgaagatggg
tttgttgaattgaagcctaaagttgtagaattcgataggttacatgagagggaagaagag
ctttatttttatgatacatttgcatatccttgggaaaaagataagcattataaaatggtt
tatcaattggagaagaagtattttcctgaccagtgttttgataaggcttttctcgaacct
ggaaagtcaaatgagaaaaacaaagatcagggaaaaagtaaaaaacctggtgatgataag
gaggtggaggataaaggattggtgttttttgaggaagagggaaattctggtaaggatgtg
aaaaaggaggttactgagaagaaggtggaggagttttttaagtgtttgaagaaagttccc
tataacgatactgaggttagtgctggggagccttaccttgttagtaggaatactgagctt
cccccgagatgggatggtcagtacggaacggtagttttggtgaataagcctaaaggatgg
acctcatttacagtttgtgggaagctgcgtcgcttgatcaaagtgaaaaaggtagggcat
gctggaacacttgatcctatggcaactggtctattgattgtatgtgttggtaaagccact
aagttcgtagagagatatcaaggaatgataaagggatatagtggagtttttcgcttaggg
gaggctacttcaacttgggatgctgattcaccggttattcaacgtgagccttgggagcat
atcaaagatgaggacataaaaaaaactgctgcatccttcttgggggagatatggcaagtt
cctccaatgttttctgccatcaaggttggaggtgaaaagatgtatgacaaagcaagaaga
ggagaaagtattgaactgtcacccagacgaatttcaatttttcactttgacattgagcgt
agcttagaagacagacaaaacttgattttccgggtcacatgttcaaaaggaacatatatc
cgatcattatgtgcagatcttgggaaggctttgggcagttgtgctcatttgactgctctg
cgaagagattcaatcggagaatattcagcagatgacgcatgggagttcaaggaactagaa
gaggcaatcactaaaggttatttctaa
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