Theobroma cacao (cacao): 18601058 Help Entry 18601058          CDS       T02994                                  Name (RefSeq) uncharacterized LOC18601058   KO K18730   PERQ amino acid-rich with GYF domain-containing protein Organism tcc  Theobroma cacao (cacao) Brite KEGG Orthology (KO) [BR:tcc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tcc03019]     18601058 Messenger RNA biogenesis [BR:tcc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      18601058    Surveillance factors     Other surveillance factors      18601058 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GYF Motif Other DBs NCBI-GeneID:  18601058 NCBI-ProteinID:  XP_007031927 UniProt:  A0AB32V8W9 LinkDB All DBs Position 4:complement(2614974..2622355) Genome browser AA seq 1675 aa AA seqDB search MADGKFELPDDLLASKTASDHSSLKGEAWDGNLEEKGLTGLVDDIKDQANSESSIPLSPQ WLYAKPADAKMLTAGASGDIRVPNSLPHGTSGDPNLKDSWRLDGSQDKKDWRRPAPDLES SRRWREEERETSLLGRRDRRKEDRRADVTSTRDVPENRTLSSSERWHDGSSRSSGHESRR DSKWSSRWGPEDKEKDSRTEKRTDAEKEDAPNDKQAFVSGCRIASERENDSRDKWRPRHR LEVHAGGSASYRSAPGFGPERGRVEGSNVRFAAGRGRSNANGSLQIGRPASASVIGSLPV DRHKTSNAYCYPRGKLLDIYRKQKTGPNFDILPDEMDHLSPITQKETVEPLAFVPPDAEE EVVLGDIWKGKTTSSGVFYNSFRDTSRGSNDSIAGEGKQSSSVNREDSVESGEKAAVNNY YQGNHAETFDVSDSQMIITKERNSSKEGEQRCLTSSDIDVTNALMSDGEIGGSRNDVYEI KSFDCQQAADLKVQKHPKWEDNESSMQFEVGNELPEDSSSLFDFPSLQPTPGSKQINLRG NNEGQSLESVTLPEDLSLCYLDPQGVIQGPYLGIDIITWFEQGYFSTDLPVRLADAPDGS PFQELGDIMPHLRMNSGSASSVNAVTRMQIPDSVECNLEETISSSASAPDLKGSAMGNKH QILSAFETSDTNFQFSGPNRSCHSEHWFSEDQSFHKFAAQEEEIIFPGSANGDRLKVSGD MQGTLGNPASHLSIANEFSKANVPSHRDDELHPFGLLMSELKGTHSKHSQSSNMASSIGD KGQFLDPSLDIEATFSGQSVVGTVAEQTSFPEAWSDDYRRNALSNSNIHLGTTGARLSSQ REQEYNGFDLVQHLMSQKLPNEPLQEQNRFSPHTFSHSAGFGVEQIQNFDLMQSKNLNLQ QSIHHSAPHIEHLLELQYQQQQQLELQRQQQQQQLEIQRQQQQQQQLEIQRQQQQQQLEL QRQQQLRHQQMKLLQQQQQQQQLQQQHSQAQQLLLDQLLQHQMSDPGYGQPKFDAARDNV LDQVHLQMHLLNELQQNSHASRHLDPSLEQIIQAKINLSALQGQQADFLDFMSQTKYGNM LPSEHQLRLQQEQLQVQQLSMALRQQLGMEGERRSAGSWSVDEAGQFVRNISHHQAQSVG LNASDIYQQRHSSLEEQFSNLRRNHSLQEQQQRGIFDPNHAAFDRLTLPAVAPGMKVDNV NSLDLAEHLFMRSNNQLGPFSSGISLSQQISGDVYASHPDAIESLHSRKNGQLENSWTEK QRQQLQLEAELQRRESEVDSSAWASAGGVHENSKKALMDILHQKLGIQSVQSSEVDYQHP ISSSRGRETFWPVSEPQTSNFPFNHFPKQEVHVNDSFMEGSRNSNSSALLQDHLFGVAVS DCVNHMGNSERLALKAGSGSFAEEQSFLLGIEDPSRSSYADASLMGKSAANKELAVLEGK KERKKGLKGMIARSGSVSGSEDNMAEQVETLDCGDLQSGIQSRHDSLSTGGNGRLYSYEI GLDTSVGEDASNDRLLSLPKGLDKVSQKCPPVSRVSSSQDVFSDQSSVAFVKQKNSTSLA TSDEGRQEAVGNTGAVRIAETQASVKKDVRFRRTSSCSDAAVSEASFIDVLKKPVLHGTE AATNGAALEPSDGVSQAGRSGKKKGKRGRQIDPALLGFKVTSNRIMMGEIQRLDD NT seq 5028 nt NT seq  +upstreamnt  +downstreamnt atggctgacgggaaattcgagctgcctgatgatctcctcgcctccaaaactgcctctgat cactcctccctcaaaggtgaagcttgggatgggaacttggaggagaagggactcacgggg ttagttgatgacatcaaagatcaagcaaattcagagagcagcatacctctgtctccacaa tggctttacgctaaacctgctgatgctaaaatgttaactgctggagcttctggggatata cgagtgccaaattcgttgccccatggaacctcgggtgatcccaatctgaaagatagttgg cgattagacgggtcccaagacaagaaagactggaggaggcctgcacctgatcttgaaagc agtcgccgttggcgcgaagaggagagagaaacaagcttactaggccgaagagatcgtaga aaagaagatcgccgtgctgatgttacttcaacgagggatgttcctgaaaataggaccttg tcgtcttcagagcgatggcatgatggtagcagtcgtagttctgggcatgaatctcgtaga gacagcaagtggtcttcgagatggggtcctgaagacaaagaaaaggattcccgaactgag aagaggacagatgctgagaaggaagacgcccctaatgacaaacaagcttttgtcagcggg tgccgcatagcgtcggagcgcgagaatgattctcgtgataaatggaggccacgacatcgt ttggaagttcatgcaggtgggtcagcttcttaccgcagtgctccaggatttggtccagag aggggacgagtggagggatcaaatgtgcggtttgcagcaggacgaggaaggtcaaatgct aatggaagcctacaaattggaaggccagcgtctgcttctgtaattggatctcttcctgtc gacagacacaagacttctaatgcatattgctacccaaggggaaaactccttgacatttac cgcaagcaaaagactggtccaaattttgacatcctacctgatgagatggatcatttatca ccaataacacaaaaagaaactgttgagcctttggcttttgttccacctgatgcagaggaa gaggttgtccttggagatatatggaaaggaaaaaccactagcagtggtgtgttctacaac tcatttagagacactagtaggggatcaaacgacagcattgctggtgaagggaaacaaagt tcctcggttaatagggaggatagtgttgaatctggtgagaaggctgctgtaaacaactat tatcaagggaatcatgctgagacatttgatgtgtcagattcacagatgattattaccaag gaaaggaatagttcaaaagaaggtgaacagagatgtctgacatcatctgatatagatgta accaatgctttaatgtcagatggggagattggtgggtccagaaatgacgtgtatgaaata aaatcatttgattgccaacaagcggcagatttgaaagtgcaaaagcaccctaagtgggag gataatgaatcatccatgcaatttgaagtgggtaatgagcttcctgaagactcaagttct ctatttgattttccatcactacagcctactccaggcagtaagcagataaatcttaggggc aataatgagggacaatcactggaaagtgttacccttcctgaggatttgagtttgtgctat cttgatcctcaaggggtaattcagggaccatatctggggattgacattattacatggttt gagcaaggttatttcagtacagacttacctgttcgattggcagatgctccagatggttca cctttccaagaacttggtgatatcatgccacacctaagaatgaattcaggttctgcctcc agtgtgaatgcagttacaagaatgcaaatacctgattctgttgaatgcaacttggaagag accatatcctcttctgcttctgctcctgatttgaaggggtctgcgatgggaaataagcac caaattttgtctgcttttgagacttctgatactaattttcagtttagtggacctaatcga agttgtcattctgagcattggttttctgaagatcaaagcttccataaatttgctgctcaa gaagaggaaattatttttcccggaagtgctaatggtgaccgtttgaaagtttctggcgac atgcaaggtactttaggcaatcctgccagccatttgtcgattgcaaatgaattttcaaaa gccaatgtaccttctcatcgtgatgatgagttgcatccttttggattgttgatgtctgag ttgaaaggcactcattcgaagcattctcaatcatctaatatggcttcaagcataggtgat aaagggcagtttttagatccttcgcttgatatagaggccactttttctggtcagagtgtt gttggtacagtggctgaacaaacttcttttccagaggcttggtctgatgattatagaaga aatgctttgtctaactccaacattcatctaggcactactggtgctcggctgtcatctcaa cgggagcaagaatacaatggttttgacctggtacagcacctaatgtcacaaaagttgccc aatgaaccacttcaagagcaaaatcgattctctcctcataccttttcacattcagctgga tttggtgtagagcaaattcaaaattttgatcttatgcagagtaagaatcttaatctccag cagtcaatccatcattcagctccacacatagaacatcttttggaacttcagtatcaacag cagcagcagttggaacttcagcggcagcagcagcagcagcagttggaaattcagcgacag cagcagcagcagcagcagttggaaattcagcgacagcagcagcagcagcagttggaactt cagcgacagcagcagcttcgtcaccagcaaatgaaattgttgcagcagcagcaacaacaa caacaattacaacagcagcattcccaagctcagcagttgcttcttgatcaattgctgcag catcagatgtctgatcctggttatggtcagcccaaatttgatgctgctagggacaacgta cttgatcaggttcatttacaaatgcatctcctgaatgaattgcagcagaattctcatgct tcaaggcacctggatccatcactggagcagatcatccaagcaaagattaacctgagtgct ctccaagggcaacaggctgactttttggatttcatgtcacaaacaaagtatggcaatatg ctcccttcagagcatcagcttcgtcttcaacaagaacagttgcaagtgcagcaattatct atggcactgaggcaacaattaggaatggagggggaaagacgaagtgctgggtcatggtct gtagatgaagctggtcagtttgtcaggaatatcagtcatcaccaggctcagtcagtgggt ttgaatgcttcagatatttaccagcagaggcattcatctcttgaagagcaattcagcaat cttagacggaatcattctttgcaggagcaacagcagcgagggatttttgaccccaaccat gcagcatttgacaggttgactcttcctgcagtagcccctggaatgaaagtagacaatgta aattctcttgatctagctgagcatctctttatgcgctcgaacaaccagctgggtcctttt tcttctggtatctctcttagtcaacaaatttcgggtgatgtatatgcttcacatccagat gcaatagagagcttgcactctaggaaaaatgggcagctagaaaatagttggactgaaaaa cagagacaacaattacagcttgaagcggagctgcaaagaagggagtctgaagttgattca agtgcttgggcatcagctggaggagttcatgaaaactctaagaaagctttaatggacatt cttcaccaaaaactgggtattcaatctgtacagtcatcagaagtagattatcaacatccc atttcatcttccagaggtcgggaaaccttttggcctgtttctgagccacaaacttccaat tttccttttaatcattttccaaagcaggaagttcatgtgaacgattcgtttatggaaggt tctcgaaattccaattcaagtgccttgttgcaagatcatttgtttggagttgctgtgagt gattgtgtcaaccatatgggtaactctgaaagattggctcttaaagccggttctggctcg tttgcagaagaacagtcattcttgttgggcattgaagatccttctcgtagtagttatgca gatgccagcttgatgggaaaatcagctgcaaataaagagttagcagtgctggagggaaag aaggagaggaaaaaaggattgaaaggcatgatagcaaggagtggctctgtgtcagggtct gaggacaacatggcagagcaagtagagactttggactgtggtgacttacaaagtggtatc caaagtcggcatgattctcttagtactggtgggaatggcaggttgtatagttatgaaatt ggattagatacatcagttggagaagatgcttctaatgataggttgctatcgctgccaaaa gggcttgacaaagtttcacagaaatgcccacctgtgtcacgggtttcatcatcccaggat gttttttctgatcaaagctcagtggcatttgtcaagcagaaaaattctacaagccttgca acttctgatgaaggaagacaggaagctgtggggaatacaggtgcagtgaggattgcagaa actcaggcatctgtgaagaaagatgtccgttttagaaggacctcatcttgcagcgatgct gcggtgtcagaggcatcattcatagacgttcttaagaagccggttcttcacgggaccgag gcagcaacgaatggcgctgctttggaaccatctgatggggtttctcaagctggacgaagt ggcaagaagaaagggaagagaggaaggcagattgatcctgcccttctgggtttcaaggtc acaagcaaccgcataatgatgggtgagatccaacgcctcgacgattaa

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