Theobroma cacao (cacao): 18601068
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Entry
18601068 CDS
T02994
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18601068
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18601068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CREPT
ABC_sub_bind
PspA_IM30
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
18601068
NCBI-ProteinID:
XP_007031939
UniProt:
A0AB32V639
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Position
4:complement(2687879..2692626)
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AA seq
526 aa
AA seq
DB search
MGSSFNPQILVEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDEFGRNAAFRLISIWEERKVFGS
RGQILKEELVGRQSENNSSRNGRHLGLKLQKQPVGSTVDKIVSGYQVVYGSQMDEDVILS
KCRNAMSCIEKVDKEIGSDVNSGQFHGSALVEEVQGQHAVLRDCIEQLTAAASSRASLIS
HLREALQEQEFKLEQVRTQLQSAQSQSEQAGNICRQLLSCENPQLVAEESSKESQTSIAP
QSFIPAATEQSAPVMYSRQLSFPDNSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLS
SLASEGVIGNPTKESSGDYPSEKRPKLENDQPYIPSQNPQQAPVSPFPRPESHQHNVVTT
TQQLTPNEVPPPPSSSPPPLPPLPPMPPYAVPQYLPTAGSINGAPYSYGVTQSQQPSLPG
YSVVGTAMTGISPFATSSTNSYQNFQGSEGFYNQPSSMPAVPISRQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctcattcaacccacaaattttggtcgagaagctagccaagctcaataactca
caagcgagcatagagactttatcacattggtgtattttccatatgaataaggcaaaacaa
gttgttgaaacttgggacagacaatttcattgctccccacgtgagcagagattggccttt
ctgtatctagccaatgacattttgcagaatagcaggcgtaagggttcagaatttgttggt
gaattttggaaggttctgcctgatgctcttcgcgatgtgattgaaaatggggatgagttt
ggaaggaatgctgcatttcgtctgatcagtatatgggaggagagaaaagtatttggttct
cggggacaaattcttaaggaagagcttgttggcagacaatcagaaaataatagtagtaga
aatggcaggcatttaggcctcaagctgcagaagcagcctgttggaagtacagtggacaaa
atagtttcaggctatcaagttgtttatggtagccagatggatgaagatgttatattgagc
aaatgcaggaatgctatgagctgtattgagaaagtagataaggaaattggtagtgatgtc
aattcagggcagttccatggatctgcacttgtggaggaggtgcagggtcagcatgctgta
ttgagagactgtattgagcagctaacagctgctgcatcatcgagagctagtctcatctca
catttgagagaggcccttcaggagcaggaattcaagctggagcaagttcgtacacaactt
cagtctgcacagtcccaatcagaacaggcaggtaatatctgcagacagttattaagttgt
gagaatccccagttggtggcggaggaaagttcaaaggaatctcaaacatctattgcacct
caaagttttattccggcagctacagagcaatcagctcctgtgatgtattcccggcaactg
tcttttcctgataattctggccacattgaggaagatcctcggaaatctgcagctgctgca
gtggcagcgaagctaactgcatcaacatcctcagcccagatgctttcctatgtcctctct
tcccttgcttctgaaggtgttattggcaatcctacgaaagaatcttctggtgattaccct
tcggagaagaggcctaagcttgagaatgaccagccttacataccatctcagaatccccaa
caagcaccagtttcaccatttccgcgccctgaatctcatcagcacaatgttgtgaccacc
acccagcagttgactccaaatgaagtgccacctcctccatcatcgtcccctccaccactg
ccaccgctgccgccgatgccaccatatgcagtgccccagtacctgccaactgctggatca
ataaatggtgcgccttatagctatggcgtgacccagtcacagcagccttccttacctggt
tattcagtggttgggactgcaatgaccggcatctccccatttgccacgtcgtctactaat
tcttaccagaatttccaaggttccgaaggtttttataaccagccatcatccatgccggca
gttccgatatctcggcaatag
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