KEGG   Theobroma cacao (cacao): 18601184
Entry
18601184          CDS       T02994                                 
Name
(RefSeq) WD repeat-containing protein LWD1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    18601184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18601184
   03036 Chromosome and associated proteins [BR:tcc03036]
    18601184
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     18601184
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     18601184
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3
Other DBs
NCBI-GeneID: 18601184
NCBI-ProteinID: XP_007032098
UniProt: A0A061EL36 A0AB32V7Z7
LinkDB
Position
4:complement(3605285..3610445)
AA seq 346 aa
MGAISDPNPEGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRLEI
VQLDDSNGEIRSDPNLSFDHPYPPTKTIFIPDKECQKPDLLATSSDFLRIWRISDDHSRV
ELKSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRFMAT
IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRL
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggtgccatcagcgatccgaacccggagggttcagacgagcagcagaaacgatcggag
atatacacgtacgaggccccgtggcacatctacgccatgaactggagcgtccgccgagac
aagaagtaccgcctcgccatcgccagcctgctcgagcagtatcccaaccgactcgagatc
gtccagctcgacgactccaacggcgagatccgctccgacccgaatctatctttcgaccat
ccctatccccccaccaagacaatcttcattcctgacaaggagtgccagaagcccgacctt
ctcgccacctcctccgacttcctacgcatttggcgcatctccgacgatcactcccgcgtc
gaactcaagtctctccttaacggcaacaagaacagcgagttctgcggtccgctcacctcc
ttcgattggaacgaggcggagcccaagcgtatcggcacttcctccatcgacactacctgc
actatctgggacatcgagcgggagactgtcgacacccagcttatcgcccatgacaaggag
gtttatgatatcgcctggggcggcgttggtgtttttgcttctgtctccgccgacggttcc
gttagggttttcgacctgcgcgacaaggagcactccaccatcatttatgagagctcggag
cccgataccccgcttgtccggttggggtggaataagcaggaccctagattcatggccacc
atcataatggacagcgccaaggtggttgtgctggatatccgcttccccacactgccagta
gttgagcttcagaggcatcaggcaagcgtcaacgccatcgcctgggctcctcacagctcc
tgccatatttgcaccgccggggatgattcccaggccttgatttgggatttgtcttccatg
ggtcagcctgtggagggcgggcttgatcccattcttgcctacaccgctggggctgaaatc
gagcagttgcagtggtcttcttcccagcctgattgggttgccatcgccttctccaccaag
cttcagattctcaggttgtga

DBGET integrated database retrieval system