Theobroma cacao (cacao): 18601188
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Entry
18601188 CDS
T02994
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18601188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18601188
03012 Translation factors [BR:
tcc03012
]
18601188
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18601188
Translation factors [BR:
tcc03012
]
Eukaryotic type
Release factors
18601188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
18601188
NCBI-ProteinID:
XP_017975108
UniProt:
A0A061EL41
A0AB32W579
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Position
4:3645984..3648611
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AA seq
437 aa
AA seq
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MADGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNSSTGEIVIKHLNKEQEADQSNFRD
PATSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDEVSDDGEVYDDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcacgagaccgataaaaacatcgagatttggaaaataaaaaagctaatc
aaggcgttggaatctgccaggggtaatgggaccagcatgatttctcttatcatgcctcct
cgtgatcaaatatcccgtgtcacgaagatgttgggtgatgaatttggaactgcatcaaac
atcaaaagcagggtcaaccgtcagtctgtgttggctgccattacttctgctcaacagagg
ctgaaactctataataaggttccccccaatgggctggtgctgtatactgggacaattgtt
actgaagatggcaaggaaaagaaggtgacaattgactttgagcctttcaaacctataaat
gcatcattatacctttgtgataacaagtttcatactgaagctttgaatgagcttttagag
tctgatgacaagtttgggtttatagtcatggatgggaatggcacattatttggtacgtta
agtggaaacacaagagaggtgcttcataaattcactgttgacctaccaaagaagcatgga
agaggaggacagtcagctctgcgatttgctcgtctgagaatggagaaacggcacaactat
gtgagaaaaactgcagaacttgctacacagttctttattaatcctgctaccagtcagccc
aatgttgccggactaattctggctggttcagctgacttcaagactgagttgagccagtct
gacatgtttgatcctcgtttgcaagccaagattttgaatgttgttgatgtgtcttacggg
ggtgaaaacggttttaatcaagctattgagttgtcagctgaaatcctgtcaaatgtaaag
ttcatacaagaaaagcgattaattggaaaatactttgaggagataagccaggatactgga
aagtatgtgtttggcgtagatgatacattgaaggctctggaaatgggtgctgtagaaatc
cttattgtgtgggaaaatctagacatcaatagatatgtactaaaaaatagttcaactgga
gaaattgtcataaaacacctgaacaaggagcaggaggctgaccagagcaatttccgtgat
cctgccacctctgcagagttggaagttcaggaaaaaatgcccttacttgagtggttcgcc
aatgagtacaagcgctttggttgctctcttgagtttgttacaaacaaatcccaagagggg
tcacagttttgcagagggtttggtggtattggaggtatcctccgctaccagcttgacata
agatcatttgatgaggtatccgatgatggagaagtttatgatgattctgattag
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