Theobroma cacao (cacao): 18601219
Help
Entry
18601219 CDS
T02994
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18601219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18601219
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18601219
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
18601219
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
18601219
BRCA1-C complex
18601219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
Nbs1_C
PTCB-BRCT
PrpF
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
18601219
NCBI-ProteinID:
XP_017975091
UniProt:
A0AB32WAK9
LinkDB
All DBs
Position
4:4136112..4148498
Genome browser
AA seq
524 aa
AA seq
DB search
MVWALLPVDPSSGEEDKYYIFRKGTYKVGRKGCDIIVHKDKGVSRIHADIIVDDMTKSSQ
VRIKDLSKYGTLVKKNLSSKKKVHEFPNKETSLEDGNLLSFGAGNATYRFCYVPLVFYIC
CAEVSQVNHHLQDKVSSIGARLTHAFSQECTHVLIDQQMPLKGDLLDAIVAKKPVLHSSW
LEFVAEKSIRTELPGYSSHVPTIIVDGVSVEVSDANTRENCLEGYAFLLESTYMYNFGDR
LQSLLEVSGSRSFCVEDTCSSSQASKCGENIHLAYVIPARSADKFDHLDKLGLSCTVNEM
ALIRAVLSGNLDQSILISSSVLVSSSCSTDETVVADSDEEHEAATSVNANASTGKVGARS
CVNREEISMEAPNYVSKAEVSTYHDATRLEDGQVIFRDDNGCLTARRDKAEESEYGNSDI
VCSQVLIVRDVNLPSTTNFITDERLINYKRFRKASIQSGNSFDNLVPFSKYPYKNNEFGS
EELAESVKEEKKRKKMEAIAEDLFNNEKGRQRGSGSLRGRHARG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggctctgcttcccgtcgatccttcctcaggtgaagaagacaagtactacatt
tttaggaagggaacctataaagtgggtcgaaaaggctgtgatattatcgttcacaaagac
aagggagtctctcgaattcatgcagatataatagttgatgatatgacaaaatcttctcaa
gttagaatcaaagatttgtcaaagtacggaacactagttaaaaaaaatctcagttcaaag
aaaaaagtacatgagtttccaaataaagaaacatctttagaagatgggaacctgctttca
tttggagctggcaatgccacttacaggttctgttatgttccgcttgtattctatatctgc
tgtgctgaggtctcccaggtgaatcatcatcttcaagacaaagtttcatccattggtgct
cgtcttactcatgctttcagtcaagagtgtacgcatgtgctcattgatcaacaaatgcct
ctgaaaggggatcttcttgacgcaatcgtggctaagaaacctgttttacatagtagttgg
cttgagtttgttgcagagaaaagcatccgcactgagcttcctggctacagttcccatgtt
ccaacaattatcgtagatggagtctctgttgaagtttcagatgctaacactcgtgaaaac
tgtttggaaggatatgcctttctgttggaatcaacatacatgtacaattttggggataga
ttgcaatcgctactggaagtgagtggttcaaggagtttctgtgttgaagatacttgttca
agtagccaggcctctaagtgtggagaaaatattcatcttgcatatgtcatccctgcaaga
tcagcagacaagtttgatcacttagataaactaggtttgtcatgtacagtgaacgagatg
gcgttaatccgtgctgttttatctggaaatttggatcaatctatattgatttcatcctca
gtacttgtttcttcttcttgctccacagacgaaacagtggtagcagattctgatgaggaa
catgaagccgctacatcagttaatgcaaatgcttctaccggtaaggttggagcccggagt
tgtgtaaacagagaagaaatttccatggaagcccctaactatgtgagcaaagcagaagta
tccacatatcatgatgctactagattagaggatggccaggtgatctttagagatgataat
ggttgtttgacagcaagaagagataaggctgaggagtctgaatatggaaattctgatatt
gtttgtagccaagttttaattgttagagatgtaaatttaccttccaccactaactttata
acagacgaaagacttataaactacaagcgctttcgcaaggcaagcattcagtcaggaaat
agcttcgacaatcttgttccattttcgaagtatccttacaaaaataacgaatttgggagt
gaggaattggctgagtctgttaaggaggagaaaaagagaaagaaaatggaagctattgca
gaggacctgtttaacaatgaaaagggaagacagcgtggttctggttctcttcgtggacgt
catgctcggggttga
DBGET
integrated database retrieval system
