KEGG   Theobroma cacao (cacao): 18601228
Entry
18601228          CDS       T02994                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18601228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcc03036]
    18601228
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18601228
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    18601228
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     18601228
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 18601228
NCBI-ProteinID: XP_017975119
UniProt: A0AB32WBX0
LinkDB
Position
4:4355312..4358568
AA seq 382 aa
MEAKGKEVRNLDHLLSQFAYKSGHSYEKVLKESEIVSGQNGHRMRADVQVPKVSPYFQTS
GEKQEMLSGNCQPKVNLLSQVVHSNKKVLKKGDVNKQNGKRRRADAQVLKVSPYFQTSGE
KQEMLSGNCKPKLNLISQVVHSNKKVLKKGDVNKQNSKRRRADAQVLKVSPYLQRSGEKE
DMESGTSKPKHKVVKASPYFLKNKDNILGGMKKAMKPAGVKPVLSASQKRDEAYQRKTPN
NTWIPPRSNAPLLQEDHTHDPWRVLLICMLLNKTSGNQARNVLSDLFTLCPDAKTATEVA
TGEIEKAIKPLGLQRKRAEMIQRMSQEYLWKEWTHVTELHGVGKYAADAYAIFCTGKGDR
VTPSDHMLNYYWNFLYGPKDTS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggaagccaaaggcaaagaggtcagaaatcttgatcatctgctttcccaatttgcatac
aagagtggtcatagttatgaaaaagtcttgaaggaaagcgaaattgtgagcggacaaaat
ggccacaggatgagagcagatgtgcaagtaccaaaggtttctccttattttcagacaagt
ggagaaaaacaagaaatgttaagtggaaactgccaaccaaaagtcaatttgctttcacaa
gttgttcatagtaataaaaaggttttgaagaaaggagatgttaacaaacaaaatggcaag
aggaggagagcagatgcgcaagttctaaaggtttctccttattttcagacaagtggagaa
aaacaagaaatgttaagtggaaactgcaaaccaaagctcaatttgatttcacaagttgtt
catagtaataaaaaggttctgaagaaaggagatgttaacaaacaaaatagcaagaggagg
agagcagatgcgcaagttctaaaggtctctccttatttgcagagaagtggagaaaaagaa
gacatggaaagtggtactagcaaaccaaaacacaaagtggtcaaagcatccccttatttc
ctgaagaacaaggataacattttaggtggcatgaaaaaagcaatgaagccagctggagtt
aaacctgttctttctgcatctcagaagagagatgaggcttaccaaagaaaaactcccaat
aacacatggattcctccacgctccaatgctccactgctccaggaggatcatacacacgat
ccctggagagtcttgcttatatgcatgcttctcaataaaacgtctgggaaccaggctaga
aacgtattatccgacctcttcactctgtgccccgatgcaaagactgccactgaggttgcc
acgggggagatagaaaaggctataaagcctcttgggctccaaaggaagagggcagagatg
atacaacgaatgtctcaggagtatttgtggaaggaatggacccatgtgactgagctgcat
ggtgtaggaaagtatgctgcagatgcatatgcaatattctgtacagggaagggagataga
gtaacgcctagtgatcacatgcttaattattactggaactttctatacgggcccaaggat
acttcttaa

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