Theobroma cacao (cacao): 18601229
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Entry
18601229 CDS
T02994
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18601229
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcc01007
]
18601229
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18601229
Enzymes [BR:
tcc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
18601229
Amino acid related enzymes [BR:
tcc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18601229
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18601229
Prokaryotic type
Other AARSs
18601229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
18601229
NCBI-ProteinID:
XP_007032159
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All DBs
Position
4:complement(4358777..4376619)
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AA seq
637 aa
AA seq
DB search
MEGLRVWRLSSSIARPLSLRQPLGLGYSSCELVLCSNSGVVTATNTRLPSRDSRSFTFTS
TSTSNLEVACAIRLKKVEPLWSKGSQPYAYKWDRSYRLGSSSSDLVPCCSDGGAAATNTK
LHSRNRGSSTSTSTSDREAVRAIRLKKVEQLRSKGLEPYAYKWDRSHSARELQEIYKNLN
NGEELDSESHHVSIAGRIVARRAFGKLAFLTLRDHSSSIQLYCEKERLLNNQFEQLKTLV
DIGDILGASGSIKRTEKGELSVKVDSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIA
NPEVADLFRKRAKIVTEIRKTVESQGFVEVETPVLQGAAGGAEARPFMTYHNSLGRNLYL
RIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMDMAEE
IVTRCALAVHGELTIDYQGVEIHLERPWRRETMHNLVKEATGIDFTEFENDLKVAKDVVM
KALGVGLDSKDKFSIEACPSLGHLLNEVFEIFVEPKLLQPTFVLDYPMEISPLAKPHRRH
AGLTERFELFICGRELANAFSELTDPLDQRARLEEQVRQHNKKRAEAVSVTDSMEEKDHK
NEDSMYEVTLDDDFLTALEYGMPPASGMAVPNDFVEV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttgagggtgtggaggctaagctcatcaattgcaaggccgttaagtttaagg
caaccacttggattgggttattcttcctgtgaactagtcctttgctcgaatagcggcgtt
gtcaccgccaccaacaccaggctgccctctcgcgatagtcggtcttttacattcacttca
acctccacttcgaatcttgaagttgcttgtgccatccgcctgaaaaaggtggaaccattg
tggagcaaagggtcgcaaccttatgcttataagtgggatagaagttatagattgggctct
tcttcctctgatctagtcccttgctgctcagatggcggcgctgccgctaccaacaccaag
ctgcactctcgcaatcgtgggtcttcgacttcgacttccacttcagaccgtgaagccgta
cgtgctatccgtttgaaaaaggtggaacaattgcggagcaaagggttggagccgtatgcg
tataagtgggatagaagtcacagtgctagggagttgcaagaaatatataagaatctaaat
aacggtgaagagttagatagtgagagtcatcatgtctctattgcaggcagaattgttgct
cgcagagcctttggaaagcttgcttttctcactttaagagatcactccagcagtattcag
ctttactgtgagaaggaaaggcttttgaataatcagtttgagcagttaaagacacttgtt
gatattggtgatatattaggtgcatctggctctatcaagcggactgagaaaggggagctt
tctgttaaggtggattcttttgcaattcttacaaaatctctgcttccgttgcctgacaag
tatcatggtctaactgacattgataagcgttatcgtcaaaggtatgttgatatgattgca
aatcctgaagtagctgatttattccggaaacgagcaaagattgtgacggagatacgaaag
acggtggaatctcagggttttgttgaagttgaaactccagttctgcagggagcagctggc
ggggctgaagcaagaccattcatgacataccataactcccttggaaggaacctttatcta
agaattgcaactgaacttcacttgaagagaatgctggttggaggatttgaaaaagtatat
gagattggtcgtatattcagaaatgaaggcatttcaactcgtcataatccagaatttacg
accatagagatgtatgaggcatattcagactacgaatctatgatggacatggctgaggaa
attgttacccgatgtgctcttgcagttcatggagagctcaccattgattaccagggggtt
gagatacatttggagaggccatggaggcgggaaaccatgcacaatcttgttaaagaagcc
actgggattgatttcactgaatttgaaaatgatcttaaagttgctaaagatgttgttatg
aaggcactgggagttgggcttgatagtaaggacaagttttccattgaagcctgcccttca
cttggccaccttcttaatgaggttttcgaaatttttgttgaaccaaagctcctgcaacct
acatttgttttggactatcccatggaaatatctcctcttgccaaaccacaccggaggcat
gcaggtttgactgagagatttgaactcttcatatgtggtcgtgaactggctaatgcattc
tctgagttaactgatcctttggaccagagagcccgcctggaagagcaagtaaggcaacat
aacaagaagagagcagaagctgtttcagtcacagatagtatggaagaaaaagatcataaa
aatgaagactctatgtatgaagtgactcttgatgatgattttcttactgctttggaatat
ggaatgcccccggcttcaggaatggctgttcctaacgattttgttgaggtctga
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