Theobroma cacao (cacao): 18601452
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Entry
18601452 CDS
T02994
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18601452
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
18601452
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18601452
NCBI-ProteinID:
XP_017975236
UniProt:
A0AB32WBH4
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Position
4:12951382..12953788
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AA seq
454 aa
AA seq
DB search
MEVTKQRLVFLFSLAALIPSLWADIAEFDEVWKQRAEQAWKNALEAYEPMPENVTSNLNY
NVNKALLKGRANKTKAFEGVTTNSTRRNLRGNHKKYIGPCMATNPIDRCWRCRKNWARNR
KQLANCVLGFGHKTEGGKQGGYYLVTDNSDDNVLNPRPGTLRHAVIQKEPLWIIFAHDMN
IKLSQELIVQSKKTIDGRGANVHIAYGAGITLQFVDNVIIHNLHIHHIRKSSGGLIRDSV
DHYGFRTVGDGDGISIFGSTNIWLDHLSMSECEDGLIDAIQGSTAITISNCHFTHHNDVI
LLGASDSYSRDKLMQVTVAFNHFGKELIQRMPRCRWGFFHVVNNDYTHWKMYAIGGSQHP
TIISQGNRFIAPNDPWAKEITNRNYAPESVWRHWVWRSEGDLFMNGAFFRTSGPPAPPHL
KYNKLQMIKAKPATFVRRLTRFSGALNCKKRVKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaactaagcagcggctggttttcctcttctctttggccgcccttattccaagc
ctatgggcagatattgctgaatttgatgaggtttggaagcaacgtgcggaacaagcctgg
aagaatgccctggaagcttacgaaccaatgccagaaaatgtcaccagtaacctgaactat
aatgttaacaaggctcttctgaaaggtcgtgcaaacaaaaccaaggcatttgagggtgtt
actactaacagcaccaggaggaacttgaggggaaaccacaaaaagtacattggtccatgc
atggcgaccaacccaattgacaggtgctggcgatgcaggaaaaactgggccaggaaccgt
aaacagctggcgaattgcgtgcttggttttggccataaaactgaaggaggaaagcaggga
gggtactatttggtgacagataattctgatgataacgtgttaaaccccaggcctggaact
ttgcgtcatgctgtgattcagaaggagcccttgtggatcatttttgctcatgatatgaac
atcaaattgtcccaggagctcatagtccaaagcaagaagacaattgatggtcgtggagca
aatgttcacattgcttatggagctggcattactcttcaatttgtggacaatgtgatcatt
cacaaccttcatattcatcacattagaaagagcagtggtggcctaatcagggactccgtg
gatcactatggtttccggactgtaggtgacggagatggaatttccatctttggatcaaca
aacatttggctggatcacctttccatgtccgagtgtgaggacggactcatcgatgccatc
cagggttccacagccatcaccatctcaaactgccatttcacccatcataacgatgtaatc
ctgttgggtgcgagtgactcctactctcgcgataaactcatgcaggtaacagttgctttc
aaccattttggcaaggaattgatacaaagaatgcctagatgcagatggggtttctttcat
gttgtcaataatgactacactcactggaaaatgtatgccattggtggtagccagcatccc
accattatcagccagggcaacaggttcattgctccaaacgacccatgggctaaagagata
acaaacaggaactatgcaccagagtcagtttggaggcactgggtgtggagatcggaagga
gacttgttcatgaacggagccttcttcagaacttctgggccacccgcacctccgcatctg
aaatacaacaagctgcagatgatcaaagccaagcctgcaacatttgttagaaggctcact
cgtttttcaggtgctcttaactgcaaaaagagggtcaagtgctag
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