Theobroma cacao (cacao): 18601453
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Entry
18601453 CDS
T02994
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18601453
03036 Chromosome and associated proteins [BR:
tcc03036
]
18601453
Transcription factors [BR:
tcc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
18601453
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
18601453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
18601453
NCBI-ProteinID:
XP_017975235
UniProt:
A0A061EEG1
A0AB32W860
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All DBs
Position
4:complement(12954051..12960012)
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AA seq
640 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAVEVDKSDILGVTWMKVPRTN
QLGVKIKDGLYYKFTGFRDQDVASLTNFFQNNCGITPEEKQLSVSGRNWGEVDLNENMLT
FLTGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHVPNTNTQFV
GDENRPPAQVFREKIMSVADVGAGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLSLN
EDLLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHTLFDFISSKGLKIMNLGDVRTTDGVAEILQNEDDDAVDPHLERIKNEAGGDESDE
EDEDFVIDKDDGGSPTDDSGDEESDASESGDEKEKPAKKVPRKEASSSKATKKKARDGED
DGKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKSNPGIAFTEVGKVLGDKWKKMSAE
EKEPYEAKARADKQRYTDEKSGYKNPQPMNIDSGNESDSA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacggatggccatctgttcaacaacatttccctcggcggccgaggaggcacgaatcct
ggacagcttaaaatttattcaggagggattttatggaagaaacaaggaggtggtaaagca
gttgaagttgataaatctgatatcttaggggttacatggatgaaggtcccaaggacaaat
caacttggtgttaaaatcaaagatgggttgtactacaagttcactggattccgtgaccag
gatgttgccagtttgaccaattttttccagaataattgtggaataacaccagaagagaag
cagctttctgtcagtggtcgtaactggggagaagttgatttaaatgagaatatgcttacc
tttttgactggttcaaaacaagcttttgaagtgtcattagcagatgtgtcacaaactcag
cttcaaggaaaaaatgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagattcactgatggagataagtttccatgtacctaatacaaacacccaattcgtt
ggtgacgaaaatcgtccaccagctcaggttttccgtgaaaaaattatgtcagtggctgat
gttggcgctggagttgaggaagctgttgtcacttttgagggcattgcgatcctcacacca
aggggtcggtatagtgtggaacttcatctctcattcttgcgactccaaggacaggctaac
gatttcaaaattcagtatagcagtgttgttcgcctgtttttgcttccaaagtccaaccag
cctcatacttttgttgttgttacacttgatccacctatccgtaaagggcaaactttgtac
ccccatattgtcttgcagttcgaaactgattatgttgttcaaagcaccttgtccttaaat
gaggatcttttgaatacaaagtacaaggataagttagaaccatcttacaagggactcatt
catgaagtgttcaccacaatactgcgtggtttatctggtgccaaagttaccaaaccagga
aaattccgtagctgtcaagatggttatgcggtcaagtcttcactgaaagctgaagatgga
gtcctatatccacttgaaaagagcttcttctttctacccaaacctcctacacttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttctcataagattaaaaactgagcaagagcatttattccggaatattcag
agaaatgaatatcatactttgtttgacttcattagttcaaagggtttgaaaattatgaac
cttggagatgtacgaaccacagacggtgtggctgaaattcttcaaaatgaggatgatgat
gcggttgacccacatcttgagcgcattaagaatgaagctggtggggatgaaagtgatgag
gaggatgaggattttgtcattgacaaggacgatggaggctctccaactgatgattctggg
gatgaagaatctgatgctagcgaaagtggagatgagaaagagaagcctgccaaaaaggtt
cccaggaaggaagcttcttcttccaaggcaactaagaagaaagctagagatggagaagat
gatgggaagaagaaaaaacagaaaaagaagaaggatccaaatgctccaaagagggcaatg
tctggcttcatgtttttctcacaaatggaaagggagaatgtaaagaaaagtaatcctgga
attgcctttacggaggtgggaaaagtacttggagacaagtggaagaagatgtcggctgag
gagaaagaaccgtatgaagcaaaggctcgagcagataaacagcgatatacagatgaaaaa
agtggctataaaaaccctcaaccaatgaacatagattcaggaaatgaatctgacagtgca
tag
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