Theobroma cacao (cacao): 18601541
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Entry
18601541 CDS
T02994
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18601541
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18601541
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
18601541
NCBI-ProteinID:
XP_007032570
UniProt:
A0AB32V778
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All DBs
Position
4:complement(15651195..15657785)
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AA seq
466 aa
AA seq
DB search
MSTSSQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
ANDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PEHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDPSLLATQVPGLPAAPNVWQ
NPQAAPLYPGTDYTASAAMQAQPPAGQVPAWDPNLQARPPYGSVPGTVPSQSYQSSSVPT
YVNAATPAGSSPLSHPGVSSMRMPQPGVNVRPGGAPVPGQPPYYGQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcaagccaaccccagttccgttacacccagacgccatcgaaggttctccat
ctccgaaatctcccgtgggagtgtacggaagaggaactcgtcgagctttgtaaacccttt
gggaagatcgttaacactaagtgcaatgtcggcgccaatcgaaaccaagcttttgttgaa
ttcgcagacttgaaccaggctatttctatggtttcatactatgcttcatcctcagagcca
gcacaagttcgtggaaaaactgtgtatattcaatattcaaacagacatgaaattgtcaac
aacaagagccctggagataccccaggaaatgttttgctggttaccattgagggtgtggaa
gctaatgacgtgaccattgagaccattcacttggtattttctgcatttggttttgtgcac
aaaattgctactttcgaaaaggctgcaggattccaggctttaatccaattcactgatgct
gaaactgcatcttcagcaaggaatgccttggatgggagaagtattccaaggtacttgctt
ccggaacatgttacttcttgtcacctgcgaatctcatattctgcacacacggatctgaat
atcaaatttcaatctcatcggagcagggactataccaacccataccttcctgtgaatcct
actgcaatggagggacttatgcagcctgtagttggtccggatggaaaaaagcaagaacct
cagagtaatgtgctacttgcttcaattgaaaatatgcaatatgctgtgacagttgatgtt
cttcacacggtgttctctgcatttggcacagtccaaaagattgcaatatttgagaagaat
ggtggaacacaggcactaattcagtatcctgatgtcacaaccgcggctgtcgccaaagaa
gccttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattacacaatctca
gacccaagtttgcttgcaacacaagttcctggtctgcctgctgctccaaatgtttggcag
aatcctcaggcagctccattgtaccctgggactgactatacagcttcagctgcaatgcag
gctcaaccccctgctggacaagttccagcttgggatccaaatttacaggctagaccacct
tatggatcagttcctgggacagttcccagtcaatcatatcaatcatcctcagtacctaca
tatgtgaatgctgcaacacctgctggttcatcacccctttcgcatcctggtgtgtcttcc
atgagaatgccacagcctggggtcaatgttagaccaggtggtgcaccagtgccgggtcag
cctccttattatggtcaatga
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integrated database retrieval system
