Theobroma cacao (cacao): 18601598
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Entry
18601598 CDS
T02994
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04120
Ubiquitin mediated proteolysis
tcc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18601598
04120 Ubiquitin mediated proteolysis
18601598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18601598
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18601598
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
U-box type E3
18601598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
18601598
NCBI-ProteinID:
XP_007032650
UniProt:
A0AB32V7W2
LinkDB
All DBs
Position
4:complement(16401185..16408254)
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AA seq
1042 aa
AA seq
DB search
MATQKPQRTPEEVEDIILRKIFLVTLKENQENSSSDPKVVYLERTAAEILSEGKSLLLSR
DLMERVLIDRLSGDFPNSESPFLYLIGCYRRAHEEIKKISNMKDKTLRSEMEAAAKQAKK
LAASYARIHLGNPEWFSNGNLRDSNLKTGSSLSSNSPLLPLLFAEVSSGVMLDGFGGNEL
GSGVDCPPGFLEEFFKDSDFDTLDQILKGLYEDLRGSVLKVSALGNFQQPLRALLYLAHF
PVCAKSLVNHPWWIPKGVYLNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSEA
STRRQDNSFIKTIMNTLYDGLAEVLLCLLKNTETRESVLEYLAEVINKNASRAHIQVDPI
SCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPNYVFYSNRLDLRGLTALHATSEEVS
EWMNKDNPVKTDGTRPHGDGENRLLQSQEATSSGSTLSVKPTSSSGEKAKYPFICECFFM
TARVLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQAPSSQLELDISRLEKEIELYS
QEKFCYEAQILKDGALIQHALSFYRLMVIWLVGLVGGFKMPLPSTCPMEFASMPEHFVED
AMELLIFSSRIPRALDGVLLDDFMNFIIMFMASPQFINNPYLRAKMVEVLNCWMPRGSGS
SATSTLFDGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSH
RNAWKQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNSAEWERRSAQ
ERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQ
LVGPQRKSLSLKDPVKYEFRPKELLEQIVRIYVHLARGDAKNIFPAAISSDGRSYNEQLF
SAAADVLRRIGMDGRIIEDFIELGAKAKAAASEAMDTEAALGDIPDEFLDPIQYTLMKDP
VILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPHTELKARIQEFIRSHELKRRG
EGLNMQSSKGTIQPTSGEMLID
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaaaaaccccaaagaactccagaagaagttgaggatataatcttaagaaaa
atcttccttgtaacccttaaagaaaaccaagaaaactcttcttctgatccaaaggtagtt
taccttgagaggaccgcagctgagatcttaagtgaaggaaaaagtcttttactttcacgt
gatttaatggaaagggttttaattgatcgtctttctggtgactttcccaattccgaatct
ccttttctttatctcattggttgttatagaagagctcatgaagaaatcaagaagatttcc
aacatgaaagacaaaacgctgcgttctgagatggaggctgctgctaaacaggctaagaag
ttggctgcttcttatgctaggattcatctgggaaatcctgagtggttttctaatgggaat
ttaagggatagtaacttgaaaacgggttcttctttgtcttcgaattcgcctttgttgcca
ttactttttgctgaagtttcaagtggagtaatgcttgatgggtttggagggaatgaattg
ggaagtggggtagactgcccaccagggttcttggaggagttctttaaggattcagatttt
gatactttagaccagattttaaaagggttgtatgaggatttaagagggagtgttttgaaa
gtttcagctttggggaattttcagcaacctttgagggctttgttgtatttggcacatttc
cctgtttgtgctaagagtttggttaatcatccttggtggatacctaaaggggtttacttg
aatggacgtgttattgaaatgactagcattttgggtcccttttttcatgttagtgctttg
cccgatcataccattttcaagagccagcccgatgttggccagcagtgcttctcagaagca
tcaactcgacggcaagataactcattcatcaagactatcatgaatactttatatgacggt
ctggcagaagttcttctgtgtctccttaaaaatactgagacccgtgagagtgtccttgag
tatcttgcagaagtcatcaataaaaatgcatccagggcccatatacaggttgatcctata
tcttgtgctagttctggaatgtttgtcaatctcagtgctgttatgcttcgactttgtgaa
ccgtttttggatgcaaatttaacaaaaagagataagattgacccaaactatgttttttac
agtaatcgtttggatttgagggggctaactgctctgcatgcaacctcagaagaagtttct
gaatggatgaacaaagataatcctgtaaaaactgatgggaccagaccacatggcgatggt
gaaaatcgtctgctgcaatctcaagaagctaccagttctggaagtaccctcagtgtgaag
ccaacctcaagtagtggtgaaaaagctaaatatccatttatttgtgaatgcttctttatg
actgctagggtactcaacttgggcctcctaaaggcattttctgacttcaagcatctagtc
caggacatttcaagatgtgaagatactcttgccaccttaaaagctatgcaaggacaggca
ccttcttcacaactggagctggatatatctaggcttgagaaagaaatagaactatattcg
caggaaaaattttgttatgaggctcaaattttgaaggatggggcgcttattcaacatgca
ctttcattctatcgactaatggtgatttggttagttggcttggttggcggatttaaaatg
cctctaccatctacttgtccaatggaatttgcttctatgccagagcactttgtggaagat
gctatggaactattaatattttcctcccggattccaagagctttggatggggttttactg
gatgactttatgaattttattattatgtttatggcaagtccccaatttatcaacaacccc
tatctcagagcaaaaatggttgaagttttgaactgttggatgccccgtggaagtggttca
tctgccacatctacactatttgacgggcatcaattgtccttggaatatcttgtgaggaat
cttttgaagctttatgttgacattgagttcacaggttctcatacacagttctatgataag
ttcaacattcgccataatattgctgaacttcttgaatacctttggcaagttcctagtcat
cgtaatgcgtggaaacagattgctaaggaagaagaaaagggtgtttatctgaatttcttg
aacttcctgatcaacgatagcatctacctccttgatgaaagtctcaacaaaattcttgaa
ctcaaagagcttgaagctgagatgtcaaattctgcagaatgggagcggaggtcagctcag
gaaaggcaagagagaactcgactattccactcccaggagaacattatacggattgatatg
aagttggctaatgaggatgttagtatgctggcatttacatctgagcagattacagctcct
tttctactccctgagatggttgaaagagtggccagtatgctcaattactttttattgcaa
ctagtgggccctcaaagaaaatctcttagtctgaaagatcctgtaaagtacgaattccgt
ccaaaagaattactcgagcagattgtccgcatatatgttcatctggcaaggggtgacgcc
aaaaacatatttccggcagctatctccagtgatggtcgttcatacaatgaacagttgttt
agtgctgcagcagacgtgcttcggagaattggcatggatgggaggattatagaagatttt
attgaacttggtgcgaaggccaaggctgcagcttctgaggccatggacactgaagctgcc
cttggagatatacccgatgaattccttgatccgattcaatatactttaatgaaggatcca
gtgattttaccatcttcaaggatcacagtagacagacctgtcatccagagacatcttcta
agtgatagtactgacccattcaatcgatcccatcttaccgcggatatgctgattccacac
actgaattgaaggcacgaattcaggagtttattaggtcccatgaattgaagaggcgtgga
gaaggtttaaacatgcagagctccaagggaacaatacaaccaacaagtggggaaatgtta
attgactag
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integrated database retrieval system
