Theobroma cacao (cacao): 18601600
Help
Entry
18601600 CDS
T02994
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18601600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcc04040
]
18601600
Ion channels [BR:
tcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18601600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
TMEMspv1-c74-12
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
18601600
NCBI-ProteinID:
XP_007032653
UniProt:
A0AB32V6K8
LinkDB
All DBs
Position
4:complement(16428794..16433268)
Genome browser
AA seq
707 aa
AA seq
DB search
MPSPSNLSLSRWIGLCQLQNSPGENSDHSGDINEDNPISNTVECYACTQVGVPVFHSTSC
DHAHQPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPLGRVLDPRSKRVQKWNRAFLL
ARGMALAIDPLFFYALSIGRGGFPCLYMDGGLAAIVTVLRTCVDAVHLFHLWLQFRLAYV
SRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKL
IMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCW
YVLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQFLFPAEAVGNPCGGNSTKVVGKPLC
LDVQGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSIC
IVLAGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQ
KWATLGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVF
SKDEKIIREGDPVQRMVFIVRGRIKRSQSLSKGMVATSIIEPGGFLGDELLSWCLRRPFI
DRLPASSATFVCVESIEAFGLDANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVN
IQLAWRRYRTRTRGPMISVTENGNSSDRRLLQYAAMFMSIRPHDHLE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccttctccgtccaacttgtccctctcaaggtggattggactctgccagcttcaaaac
tcccccggcgagaactctgatcacagcggcgacatcaacgaagacaacccaatttccaac
accgtagaatgctacgcttgcactcaagtaggagttccagttttccactccaccagctgc
gaccatgctcaccaacctgaatgggaagcctcagcaggctcttcccttgttcccattcag
gcccgagcgggccagaagaagactcaagctgctgcatctcggcacccttctggcccgtta
ggacgtgtgcttgatccaaggagcaagcgcgtgcagaaatggaaccgcgcgttcctgctg
gctcgtggcatggccttagctattgatcctctgtttttctatgctttatcgataggcaga
ggtggctttccttgtttgtacatggatggtggccttgccgccattgtaaccgtccttcgc
acgtgtgtcgacgccgtgcatttgtttcatctatggcttcagttcaggctggcgtacgtg
tcaagggagtcactcgtcgtcggttgcggcaaactagtgtgggacgcacgtgccatagct
tctcattacgttcgttcccttaaaggtttctggtttgatgcctttgtgattctcccagtt
cctcaggcagtattttggttagttgtacccaaactaatcagagaagagcagatcaagctt
ataatgactatactgctattaatcttcttgttccaattcctcccaaaggtttaccatagc
atttgtttgatgagaaggatgcagaaggtcacaggttacatctttggcaccatttggtgg
gggttcggccttaatctcatagcctacttcatagcctctcatgtcgctggaggatgctgg
tatgtcctcgcaatacagcgcgtagcctcatgcctccggcaacaatgtgagagaagtgag
aggtgcaaactctcgttgtcttgctcagaggaggtgtgttaccaatttctatttccagcc
gaagcagtagggaatccttgtggtggtaactcaacaaaagttgttggaaaaccattatgt
ttagatgttcaggggccattcaattacggtatttatcagtgggctcttcctgtcgtttct
agcaattctgttgctgttaagatcctttatcccatattttggggcttaatgactctcagc
acctttggaaacgatcttgaaccaacaagtcactggttagaagtgatgttcagtatatgc
attgtgcttgctggattgttgctcttcactttattgattggaaacatccaggttttcttg
catgctgtcatggcgaagaagagaaaaatgcagctgagatgtcgtgacatggaatggtgg
atgaagcgtaggcagttaccatcccgtttgaggcaaagagttcgccactttgaacgccag
aaatgggcaactctgggaggagaggatgaaatggaattaatcaaagacttgcctgaaggc
ctccggagggacattaagcgctacctttgccttgacctcatcaaaaaggttcctctgttc
cacaacttggatgaccttattcttgacaacatctgcgatcgagttaagccacttgtcttc
tctaaagacgaaaagataattagagaaggagatcctgtgcaaagaatggtgtttatagtt
cgtggacgcataaagcgtagccaaagccttagcaaaggcatggtagccacaagtataatt
gagccaggaggctttttgggtgatgagctgctctcctggtgtcttcgtcgcccatttata
gaccgtcttccagcctcatctgcaacatttgtttgtgtagagtcaattgaagcatttggc
cttgatgcaaacaatctcagatacatcactgatcacttcaggtacaaatttgccaatgag
aggcttaagagaacagcgagatactattcatccaattggcgaacatgggcagctgtgaat
atacaacttgcctggcggcgttacagaaccaggactagaggtccaatgatttctgttaca
gagaatggaaacagcagtgatcgccggttgctgcaatatgctgcaatgttcatgtcaatc
aggccacatgaccatctagaataa
DBGET
integrated database retrieval system
