KEGG   Theobroma cacao (cacao): 18601626
Entry
18601626          CDS       T02994                                 
Name
(RefSeq) nipped-B-like protein B
  KO
K06672  cohesin loading factor subunit SCC2
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcc03036]
    18601626
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    18601626
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 PHD PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 18601626
NCBI-ProteinID: XP_007032702
UniProt: A0AB32V9B5
LinkDB
Position
4:complement(16606518..16619706)
AA seq 1823 aa
MSNPSSTSAVSDQPGPGLMGLAHRGIGLSNTIHSEVAQCLPLPSLPVFCGASDPELLLFD
DPTGGASRSLNRPEIIAQSSRIADLLRETDVSYLNLRDEASSATYDYVEPLELHVQVLQY
NPAAFEYVTPGLVKEQVSGGAVFERKPPESSFPHISQFQRDISSTYNQQTDVIANDAPKS
SSRKPKGKKKAANDVGLSVRPDPTELQDAIIGHFREMLEDFCGRAQIPSDDRDETEWLSL
PVNDVRMLVNEIMSVRTKRLLHLVPVDNLVKLLRVLDHQIHRAEGLSVDECEHQDSDVFS
SVFCALESIHASLAVMAHNDMPKQLYHEEIIERILEFSRHQIMDVMSAYDPSYRALHKPS
ENGAVEDDEDEELDAELGSASKKRRSTKSVKAKKSALNKVSGAVNAILQKLCTILGLLKD
LLLIEKLSDSCVLQLLKTSFTTFLVDNIQLLQLKAIGLITGIFYCYTQHRTYIIDEMVQL
LWKLPFSKRALRAYHLPDEEQRQIQMVTALLIQLVHGSANLPEALKQTSSGSPILEVSVD
DSYLTKCHESVQDTCCHFWTRVLQRLASVKTQDASELKVMIENLVTDLLTTLNLPEYPAA
APALEVLCVLLLQNAGLKSKDISARAMAIDLVGTIAARLKHDSLLCRNDKFWISEELLSG
DNDHESYPNGVCSICLDGKVEKVLYRCQGCQRFFHADCMGVREQEVPNRSWYCQFCVCKK
QLLVLQSYCESQYQDNENKNHGRSERSESSDPITKVEIVQQMLLNYLQDAASIDDIHLFV
RWCYLCLWYKDGPKSQQNFKYYLARLRSKAIVRDSGTVSSLLIRDSVKKIALALGQNNSF
SRGFDKILYLLLVSLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQVAVEGRFCDSAIS
VREAALELVGRHIASHPDVGLKYFEKVAERIKDTGVSVRKRAIKIIRDMCNANPNFSGFT
SACIEIISRVSDDESSIQDLVCKTFYEFWFEEPSGLQTQYPGDGSSVPLEVAKKTEQIVE
MLRRLPNHQFLVTVIKRNLVLDFFPQSAKAAGINPVSLAAVRRRCELMCKCLLEKILQVE
EMSNVEAEVPTLPYVLALHAFCVVDPSLCMPASDPSQFVITLQPYLKSQVDNRVVAQLLE
SIIFIIDAVVPLMRKLPPSVIEELKQDLKHMIVRHSFLTVVHACIKCLCSVTKKAGNGGT
VVEYLIQLFFKLLDSQATDNKQQVGRSLFCLGLLIRYGNSLFSGPTNKNIDVASSLSLFK
KYLLMDDFSIKVRSLQALGFALIARPEYMLEKDIGKILEAALAPSSNVRLKMQVLQNLLE
YLLDAESQMGTDKAGNDAVHYSVEGGGSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFN
EEVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLEVNQKLAHHLLMNMNEKYPAFFE
SRLGDGLQMSFIFMRSISGNARENLNEKSQSKFSGNLKGKSDAGSLTQARLGVSRIYKLI
RGNRVARNKFMSSIVRKFDNPSWNDSVVPFLMYCTETLALLPFSSPDEPLYLIYAINRVI
QVRAGALEANMKALSSNLLKADAQKTTNENGTVQLDHSRAVFNYMATVDLNGTIQEEAVV
QPALYHMTSIDLNGAIQQKLTHESISHYTPAVETTMHKMNHSETHTLSEEDMQKIQADCL
AATALQLLMKLKRHLKIVYSLNDQRCQAFSPNEPIKPGDVLTRQNIPFDISETHTSLPCT
YQELVQRYQEFKNALREDSIDYSIFTANIKRKRPNPRRGGKAMRMTGGDEDDDYDDEDWK
GGVRRLSNSGRKSYGSRGSRQRW
NT seq 5472 nt   +upstreamnt  +downstreamnt
atgagcaatccaagcagcacgtccgcggtttcggaccaaccgggtccgggactgatgggt
ttggcccaccgtggtatcggcctttccaacaccatccactccgaggtcgcgcagtgcttg
cctcttccttcgttgcccgttttctgtggcgcttcggatccggagctcctactattcgac
gacccgactggtggagcttctaggtctttgaatcgaccggaaattattgcacagtctagt
cgaatcgccgatctgcttcgcgaaactgatgtttcatatctgaatcttagagatgaggcg
agttcagctacatatgactatgtggagcccttggaacttcatgtacaagttctccaatac
aaccctgcagcatttgagtatgtcactcctggtcttgttaaggagcaagtctctggtggt
gcagtgtttgaaaggaagccacccgagtcaagttttcctcatattagtcaattccagaga
gacattagcagcacttacaatcagcagactgatgtcatagctaatgatgcaccgaaatct
tcttccaggaagccaaaaggcaagaaaaaagctgctaatgatgttggcttatcggttcga
ccagatcctacagagcttcaagatgccatcattgggcacttccgtgagatgctagaggac
ttttgtggcagagctcaaattcccagtgatgatcgggatgagacagaatggttgtcattg
cctgtcaacgatgttagaatgcttgtaaatgaaattatgtctgtacgtacaaagagactt
ctacatttggttcctgtagataaccttgtgaaattattacgggttctagatcatcagata
catcgagcagaaggtttgtcggttgatgaatgtgagcatcaagactcagatgtattctct
tcagttttttgtgccctggagtccattcatgcttctttggcagtaatggcacataatgac
atgccaaagcaattatatcatgaagagatcattgaaaggattttagagttctccaggcac
cagataatggatgttatgtcagcttatgatccatcatatcgtgccttgcataaaccaagt
gaaaatggagcagttgaagatgatgaagacgaagagcttgatgctgaactaggttctgct
agcaagaaacgacgtagtactaagagtgttaaagccaagaaatcagcattgaacaaggtc
tctggtgctgtgaatgctatactacaaaaactctgcactattcttggtttactcaaggac
ttgttgttgattgagaaattatctgatagttgtgttctacaattgctgaagacaagcttt
actacttttttggtggataacatacagctcttgcaactcaaagcaattggtttgataact
gggatattctactgttacacccaacatagaacatatataatagatgaaatggttcagctg
ctatggaagttaccattttcaaagcgagcattaagagcatatcacctacctgatgaagaa
cagaggcagatccagatggttacggctctgctgattcagttggtccatggcagtgcaaac
cttcctgaagctttaaagcaaacatcaagtgggagtccgatcttggaagtctcagttgat
gatagttatttaaccaaatgtcatgaatctgtccaggatacatgctgtcatttctggacc
cgtgtccttcagcgccttgcttctgtaaagactcaagatgcctctgagttgaaagtgatg
attgagaatctagtcactgatttactgacaacattaaatctaccagaatatcctgctgca
gctcctgctttggaggttctttgtgttttattgctccaaaatgccggtcttaaatccaag
gacatctctgcacgtgcaatggcaattgatcttgttggcacaatagcagcaaggttgaag
catgattctctcctctgtaggaacgacaagttctggatatccgaagaattgcttagtggg
gataacgatcatgaaagttacccaaatggtgtatgttcaatttgtttggatggaaaggta
gaaaaagtgttgtataggtgccaaggttgtcaaagatttttccatgctgattgtatgggg
gtaagagaacaagaagttcctaatcgtagttggtactgccagttttgtgtctgtaagaag
caacttcttgtgttgcaatcatattgtgagtcacagtaccaggataatgagaataagaat
catggtcgctcagaaaggtctgaatcttctgatccaattacgaaagttgaaattgttcag
caaatgcttttgaattatcttcaagatgctgcttctattgatgatatccatctctttgtt
cgatggtgttatctttgcttgtggtataaggatggccccaaatctcaacaaaatttcaag
tactaccttgctagactgagatcaaaggcaatagtgcgtgactcagggaccgtttcttca
ctgttgataagggattcggtcaagaagattgctttggcactgggacaaaataattctttc
tctagagggtttgacaagattctttacttgcttctggttagcttaagagagaactctcct
gtaattagggctaaggctttacgagcagttagtattattgtagaagctgatccagaggta
ttaggtgacaaacgtgttcaagtggctgttgagggaaggttttgtgactctgcaatatct
gtcagagaagcagcactggaacttgttggcagacatattgcttcacatcctgatgttggt
ttaaagtactttgagaaggtggcagagaggattaaagacactggagtcagtgtgcggaaa
cgagcaatcaaaattattcgagatatgtgcaatgcgaatcccaacttctcaggatttaca
agtgcttgcatcgagattatttctcgtgttagtgatgatgaatcaagcattcaggatctt
gtctgtaagacattttatgagttctggtttgaggaaccttctggactgcagactcagtat
cctggagatggtagttctgttccattggaggtggctaagaagaccgagcagatcgttgaa
atgctaaggcggttgcctaatcaccagtttcttgtaactgtgattaagcgtaacttggtc
ctcgattttttccctcaatcagcgaaagctgctggaatcaaccctgtctcacttgcagcg
gtacgtaggcgatgtgagttgatgtgcaagtgcttactggaaaaaatattgcaagtggag
gaaatgagtaatgtggaagcagaggttcctacacttccctatgtgctggccttgcatgct
ttttgtgtagttgacccatcactttgcatgccagcttctgatccttcccaatttgtgatt
actctacagccgtatcttaagagtcaggttgataacagagttgttgcacagttactggag
agtataatctttataattgatgctgttgtgcctttgatgcggaagttgcctcctagtgtt
atcgaagaactaaagcaggacttgaagcacatgattgtccggcattcttttttgactgtt
gttcatgcttgcatcaagtgtctttgttctgtgactaaaaaggctgggaatggtggtact
gttgttgagtacctcattcagttatttttcaaactattggattcccaagcaactgataac
aagcagcaagtggggcgttcgctcttctgtcttggattgctaatccgctatggaaactct
ttatttagtggtcccactaacaaaaatattgatgttgccagcagtcttagtttgtttaaa
aaatatcttctaatggatgattttagtataaaggttagatctctgcaggcattaggcttt
gctctaattgctaggcctgaatatatgttggaaaaagacattgggaagatattagaggca
gcattagcaccaagttctaatgttcgtcttaagatgcaagtgttgcaaaatttgttggaa
tatcttcttgatgcggaaagtcaaatgggaacggataaagccggtaatgatgcagttcat
tattctgtagaaggtggcggtagtgtccctgtagctgcaggtgctggtgatactaacatt
tgtgggggtatagtccagttgtactgggataatattctggggagatgcttggactttaat
gaagaagttcgccaatctgccctaaagatagtggaagttgtgcttcgtcaaggtcttgtt
catcctattacttgtgtgccataccttatagctcttgaaacagatcctctggaagtcaac
caaaagttggctcatcatttgctaatgaatatgaatgagaaatatcctgcttttttcgaa
agccgtttaggagatggccttcagatgtcatttatcttcatgcgttccattagtggcaat
gcccgtgaaaatctaaatgaaaaatcccaatccaagttttctggaaatttgaaagggaaa
tctgatgctgggtctttaacacaagcaaggctgggagtttccagaatttacaagctcatt
cgtggaaatcgggttgctagaaacaaatttatgtcctcaattgtgcgcaaatttgataat
cctagctggaatgattcagttgtacctttcttgatgtattgtacagaaactcttgctttg
ttaccattctcatctcctgatgaaccgctctatttgatctatgctataaatcgagtaata
caagttagagctggggcacttgaggcaaatatgaaagccttgagttcaaatttgctaaag
gcagatgctcagaagacaactaatgaaaatgggaccgttcaactggatcatagtcgagct
gttttcaattatatggctacagttgatttgaatggaacaattcaggaggaggctgtggtt
cagcctgctctctatcacatgacatccattgatttgaatggtgcaatccaacaaaagctc
actcatgagtctatttcacattatactcctgcagtggagacaacaatgcataagatgaac
cattctgaaactcatactctctccgaagaggatatgcaaaaaatccaggccgactgtctt
gctgctactgcactacagcttctcatgaagctgaaaagacacctaaaaattgtttatagc
ctgaatgatcaaagatgccaggcattttctccaaatgaacctataaagcctggggacgtt
ctcacgaggcagaacattccctttgacatcagtgaaacacacactagcctgccttgcact
tatcaagaattggtgcagagatatcaggaatttaaaaacgcattgagggaagatagtatt
gattactcaattttcacagcaaacatcaaaaggaagcgcccaaatcccaggagaggaggg
aaagcaatgcgcatgactggtggggatgaagatgatgattatgatgatgaagactggaaa
ggtggtgtacggagactgagtaatagtggaaggaaaagttacggcagcagaggcagtagg
cagcgatggtag

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