Theobroma cacao (cacao): 18601796
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Entry
18601796 CDS
T02994
Name
(RefSeq) DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcc03029
]
18601796
Enzymes [BR:
tcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
18601796
Mitochondrial biogenesis [BR:
tcc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
18601796
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
GlgB_N
Motif
Other DBs
NCBI-GeneID:
18601796
NCBI-ProteinID:
XP_017975628
UniProt:
A0AB32WC35
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Position
4:18828892..18839725
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AA seq
1033 aa
AA seq
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MSIIETPLISSNLLDKFDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHSFQC
FARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFG
FPRNEIGCSGLCPRGYVSVAEAVSSTDVEEDVSVVEEIKELLDEMKKEQRRETGNRRRRC
QIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGW
FEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHGCARVV
QAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTDLIKKQ
KLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVH
SLRTVVKENKKTGRRYGVIECNPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLF
IPSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGR
LADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKLAQVARKMK
DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLY
AGGVDKLSHEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSS
SPETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIR
RDAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITD
DKEIFGASCYAAKTTLTALGEMFQAARAIMNWLGECAKIIASENQPVRWTTPLGLPVVQP
YRVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLT
FAGVHDSYWTHASDVDKMNRILRENFVELYEVPILENLLESFQQSFPTLCFPPLPERGDF
DLRDVLESPYFFN
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcatcgaaaccccattaatttcttccaatcttttagacaaattcgatcatttt
gttcctttggataatagaaatccctcaattctttaccagaaccctccaaagatttccata
gttatgtggagaaacatagctaaacatgccatatcgagaagaacccatagttttcaatgc
tttgctagaacttatagctttctgggtacttctcaggattccatttttcatgagaaatca
aagtttcggggtttaaagtttggatccttttgctcaaactcaaggtttcttgatatgggt
ggtagaagaattggtgaggtgttaactaatgtggagtatatagggaagcaaagttttggg
tttccaaggaatgagattgggtgcagtggtttgtgcccaagagggtatgtgagtgtggca
gaggcagtttcatcaactgatgttgaagaggatgtgtctgttgttgaagaaatcaaagaa
ttgttggatgaaatgaagaaagaacagaggagagagactggaaataggcgtagaaggtgc
caaataatagagagaggaatgggcgaaagcaagtatcggttcttgagaagaaggcaagtg
aagattgagacagaggcatgggaacaagctgcaaaagagtatagggaacttttgatggat
atgtgtgagcataaattggcacccaatttgccttatatcaagtctttgtttcttggttgg
tttgagcctttgcgtgatgctattattaaggagcaagagttgtataggttagggaaactt
agagcaggttatgccggttacttggatcagttgccagctgatatgacggcagttatcaca
atgcacaagttgatgggactgcttatgactggaggggaacatggttgtgctcgagttgta
caggctgcttgtctgataggtgatgccattgagcaggaggttagaatacacaagttcttg
gagaaaacaaagaaaaaaagggttgacaaaaagaacgaagatgaaggagataagcctaat
gctgagattaaggaacaagagaagttaaggaaaaaggtgaccgatttgataaagaaacaa
aagctaccagcagtgaggcaaatagtgaaggggcaggatgacacgaagccctggggccag
gatgcgaaggctaaggttggaagccatcttattgagttattaatgcaaactgcttatata
cagcctccagctgatcagttagctgattgtccccctgatgttcggcctgcatttgtgcat
tctttaagaactgtagtaaaagaaaacaagaaaactggcagaagatatggtgttattgaa
tgtaacccactagttcgcaaaggccttgagagaactgcaaggcacatggtgattccttat
atgccaatgttggtgcccccggtcaagtggacaggctatgacagaggagcatacttgttc
ataccgtcctacattatgcgcacacatggagttaaacagcaacgtgaagctgtcaagagg
acccctaggaagcagttagaaccggtctttgaggctctggatacacttggatgtaccaaa
tggagggtaaataagcgggttcttaatgttgttgatagaatatggactagtggaggccgt
cttgcagacctggtggaccgtaaggacgttcccttaccagagaagccggatagtgaggat
gaagcagtgctgaggaaatggaagtggaaagtcagatctgtaaaaaaggaaaatagagag
aggcattcactgcgctgtgatgtagagcttaaacttgctcaggtagctcggaaaatgaaa
gatgaagaaggtttttattaccctcacaatcttgattttcgagggcgtgcatatcctatg
cacccatatttgaatcatcttggttcagatctttgtcggggtattttggagtttggagag
ggtcgccctcttggaaaatcaggtttacgctggctaaaaatacatctcgcaaatctgtat
gctggtggggtggacaaattgtctcatgagggtcgattggctttcaccgagaatcatctg
gatgatatatttgactctgcagacagaccacttgaaggaaagcgctggtggttaaaagca
gaagatccatttcagtgcttagctgtgtgcattaatctcgctgaagctttgagaagctcc
tctcctgagacatttgtttcacatatacctgtgcatcaggatggttcctgcaatggttta
caacactatgctgcacttggaagagacaagttgggagcagcttcagtcaatctggttgca
ggtgagaaaccggcagatgtttactcaggaatagctgctagagtacttgatatcatcagg
agggatgcacagaaagatcctgccgtttttccagatgcattgcatgcaaaagtattagtt
aaccaggtggataggaaactggtgaagcagacagtgatgacctcagtctatggagtaact
tacattggtgcacgagatcaaatcaagaggaggttgaaggaacgtggtgtaattacagat
gacaaagagatctttggtgcttcttgttatgctgctaagacaaccttaactgccttagga
gagatgtttcaagctgcacgtgctatcatgaattggcttggtgaatgtgcaaagattatt
gcatctgaaaatcagccagtgaggtggacaactccacttggacttcctgtcgtacaacca
taccgggtattaggaaggcatcttataaaaacttcgcttcaggttttaacactgcaacgt
gaaactgaaaaggttatggtcaagcgacagaggacagctttcccaccaaattttgttcac
tctctggatgggtctcatatgatgatgaccgcagttgcctgtaaaaaggcaggcttaacc
tttgcaggagttcatgattcatattggacgcatgcaagtgatgtggataaaatgaacagg
atactaagagaaaattttgttgaactgtatgaagtaccaatactggagaatttgttggaa
agctttcagcagtctttccctacattgtgttttcctcccttacctgaacggggagatttt
gatctaagagatgtgttagaatcaccttatttcttcaactga
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