Theobroma cacao (cacao): 18602062
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Entry
18602062 CDS
T02994
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18602062
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18602062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
18602062
NCBI-ProteinID:
XP_007033278
UniProt:
A0AB32V9T5
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Position
4:21495170..21504869
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AA seq
706 aa
AA seq
DB search
MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG
GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSGGENKKD
EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR
GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLVHQNPRK
DNPPLSFPVPHAGQNFPPPSAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSL
SSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDER
VIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVIN
EMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAG
AETAPVGPVNGFGPARSMADGPPPAAAIGPGCSGGYESFRGGGGREYEPQNNYSVPPAAV
RYSNMKGALEAKILNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSEEFRGSSEHLT
AAQSIFQSFMPSSGQSMNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPH
QSSPYQNLSVQQSPYSVTSQQVAYANINAPQTAYHNYSAQQGAYQY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaggaagaggaactttttaaagaaaccgatgaacacgccctttaaaagaaaa
ggggtcaataataataggaaaccgaaatggggtactaattctggccatgaacagccttcc
gggaattttaattctggagacactgtttatcgagtactttgtccttcgagaaaaattggt
ggtgttattgggaagggtgggagtatagtcaaagcattaagggaggagactcaggcaaag
atcacggttggtgattcagttcttggttgtgatgagagagttattattatttatagttcg
ccgatgaaggtgaaaacacagaattctgatgaggattccggtggtgagaacaaaaaagac
gaggtggtagtaatggagccttgctgtgctgcacaggatgctctgttaaaagttcatgat
caaattgctgaggatgatctttttggtgggatggcgttggatgatgataatgggaatact
gttgtcactgcacggcttttggttccaaataatatggtaggatgtcttttagggaaacga
ggtgatgtgattcaaagattgcgaagtgagacaggtgctagtattcgcattcttcctgct
gatcaccttcctgcttgtgcaatggcaactgatgaattagtgcagatatctggaaagcga
gatgttgcaaagagggctctctatgaagtttccactctcgtgcatcagaatccaagaaaa
gacaatcctccattgagcttccctgtgcctcatgctggccagaattttcctcctcctagt
gctattccacccagcaatccaatgtggtctcatcggaattcttcccctcatgatattcca
tcaatgccatggatggtccctcatggaaaccggccatctggatttgggcctggtagctta
agcagttttcctccagcacgtggtgctgaggcttcagctgagttctcgatgaaaattttg
tgcccagctgggaagattggtggtgtaattggcaagggaggctttaatgttaaacagtta
cagcaggaaacaggagcaggcattcatgttgaggatgcaacaatagagtcagatgagcgt
gtgattcgcgtttctgcaattgagggtctttggaaccctcgatcacagacaatagatgcc
attctacagcttcagaataaaactagtgaattctctgagaaaggtacagttaccactagg
ttgcttgttccatcaagtaaggttggctgcattcttgggcaaggaggtcatgtaatcaat
gagatgaggaggagaacccaggcggatattcgtgtttactcgaaggatgataagcctaag
tgtgcatctgaggatgaagagctagtacagatatctggcaattttggcgttgctaaggat
gctttggctgagattgcgtcaagacttagagtaagaactttgcgagatgtgaatgctgga
gctgaaactgctcctgttgggcctgtcaatggatttggccccgcaaggagcatggcagat
ggtccgccgccagcagctgcgataggacctggctgttctggtggatatgaatctttcagg
ggtggtggtggacgtgagtatgaacctcagaataattattctgttcctccggctgctgtt
agatactcaaatatgaaaggtgctctagaggctaaaattctaaacaatatgtcaagttct
gtaacaggcactggaggaagcaccatcttgaatagtgaggtttcgggggcaagagtaagg
ctcgaagatcctcaaactggtggctctgaagagttccgtggatcttctgagcatctaact
gctgctcaaagcatttttcaatcgttcatgccttcttctggacaaagcatgaatgcccaa
cagagttcttatcaaaatttgagtgttcagcaaagttcctatctgaacatgaatgcacag
cgtagcccctacccaaacatgaatgctcaacagagcccttatcaaaacaggcaccctcat
caaagcagcccttatcaaaatttgagtgtgcagcaaagcccctattcagttacttctcag
caagtggcctatgccaacattaacgctccacagactgcttaccacaattacagtgcgcag
caaggcgcctaccagtattaa
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