Theobroma cacao (cacao): 18602202
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Entry
18602202 CDS
T02994
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18602202
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18602202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
NPIP
Baculo_LEF5_C
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
18602202
NCBI-ProteinID:
XP_017975419
UniProt:
A0AB32WCR7
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Position
4:complement(22680291..22683364)
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AA seq
367 aa
AA seq
DB search
MERELVDLFEAAKKAADLASTDAVSSNGPEVSRCVDALKQLKAFPVTYDILVSTQVGKKL
RPLTKHPRENIHTVASDLLELWKKIVIEETTKSKKNGTTSAVKVEKIQKPSAVTAEKISN
TETVKIEKVSKSDSTKPIKVEKNEANGDTVMSEKTDRRETVKVEKTYRDERQASDVKKPS
QPPAGPPKLTSMVKCNDPLRDKFREILVEALSKVPSEADEDILDQVNACDPIRVAVSVES
VMFEKMGRSNGTQKFKYRSIMFNMKDPNNPDLRRKVLLGEVKPERLITMTPEEMASEQRQ
RENNEIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNC
NNRWKFC
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctagtggatttgttcgaggcagccaagaaagcggctgatttggcctcc
accgatgccgtttcctccaacggccctgaggtttccagatgcgtcgacgccttgaagcag
ctcaaggctttccctgtcacttacgatattcttgtttctactcaggttggaaaaaagctt
cggcctctcacaaagcatcctagggagaatatccatactgtggcttctgacttgcttgag
ttgtggaaaaaaattgttattgaagagactaccaagagtaagaaaaatggcaccactagt
gctgtcaaggttgagaaaattcagaagccaagtgctgtgacggccgaaaagatctccaat
acagaaacggtaaagattgagaaagtatctaaaagtgattcaacaaaacccatcaaagtt
gagaaaaacgaagcaaatggagatactgtaatgtctgagaaaacagatcggagagagact
gttaaggttgaaaagacttatagggatgagagacaagcatcggatgtaaagaaaccatca
cagccacctgcgggtccccctaaattgacgtcaatggttaaatgtaatgatcctttgcgt
gacaaatttcgggagattcttgtagaggccttgtctaaagttcccagtgaggctgatgag
gacatattggatcaagtgaacgcttgtgatcccatccgggttgctgtatctgtagaatct
gtgatgtttgaaaagatgggtagatctaatggcacccagaaatttaagtacagatctata
atgttcaacatgaaggatccaaacaacccagatttaaggaggaaggttcttctgggagaa
gtgaagcccgaaaggcttattactatgaccccagaggaaatggccagcgagcaaaggcaa
cgtgaaaacaatgaaattaaagaaaaagctctatttgattgtgaacgtggaggagcacca
aaggcgacaacggatcaatttaagtgtggtcgttgcggtcaacgcaagaccacttactat
caaatgcagacaaggagtgcagatgaacctatgacaacctatgtaacgtgtgtaaactgc
aacaaccgttggaaattctgttag
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