Theobroma cacao (cacao): 18602302
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Entry
18602302 CDS
T02994
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18602302
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18602302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
Motif
Other DBs
NCBI-GeneID:
18602302
NCBI-ProteinID:
XP_007033650
UniProt:
A0AB32V7C5
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All DBs
Position
4:23470340..23473706
Genome browser
AA seq
411 aa
AA seq
DB search
MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEERERSEFRLLQEQAG
LVPKQERLDFLYDSGLAVGKGSSSSAGGSGGGGGGFKALEEALPTSKAADASAKQSSSAP
GALFEDKPHSANDAWRKLHSDPLLLIRQREQEALARIKNNPVQMAIIRKSVGEKKQKDKS
HDRKENHKKHHQTSSKHRKHSSSKQHSYSEDDTSKEDKKIRSHHRKSSDYEGHYHRTESD
SEDALKEAESREKNCHTQKYRYDYQDAVKRNHDKSKHDKYSSHAPKSFDADKYQEKNRSY
DYKATAPRDDKRRNVASKLSEEEQAARLREMQEDAELHEEQRWKRLKKADEKDAREDTMA
RKSVGRNFLDAAHRSVYGAEKGGSLTIEESVRRRTHYSQGRSGSEGNAFRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagtttctgaacaagaaaggatggcacacgggaagcttgaggaacatagaa
aacgtgtggaaggcggaacagaagcatgaggctgagcagaagaaattggaagagctccgc
aagcagatccatgaggagagggagcgctctgagtttcgtcttctccaggagcaggccggc
cttgttccgaagcaggagagattggacttcttgtacgattctggacttgccgttgggaag
ggctctagtagctctgctggaggcagcggaggtggaggtggaggtttcaaagctcttgaa
gaagccctcccaacgtccaaggctgccgatgcttctgctaagcagtcttcttctgcccca
ggagccctctttgaggacaaaccccactcggcaaatgatgcctggcgcaagctccattct
gatcccttacttttgattcgccagcgtgagcaagaagccctcgcccgcattaagaacaac
cctgtccagatggccatcattcgcaaatctgttggagaaaagaaacaaaaggataagtcc
catgatcgcaaggaaaaccataagaagcaccaccagactagttccaagcatcggaaacat
tcttcatccaagcagcattcatattctgaagacgacacttctaaggaggacaaaaagatt
agaagtcaccatcgtaagagctctgattatgagggccactatcacagaacagagtcagac
tcagaagatgcattgaaggaagcagaaagtcgagagaagaattgccacacgcagaaatac
agatatgattatcaagatgctgtcaagaggaaccatgacaagtctaagcatgataaatat
tcttctcacgctccaaaaagttttgatgcagataaatatcaagaaaaaaataggtcttat
gactataaagctactgcacctcgggatgataaacgtcgaaatgttgcttctaaactttct
gaagaggagcaagctgccaggcttcgtgaaatgcaagaggatgctgagttgcatgaagag
caaagatggaagcggttgaaaaaggcagatgagaaagatgcgcgggaggatacaatggcc
cgcaaatctgttggaagaaacttcttggatgctgctcatagaagtgtctacggtgctgag
aagggaggaagcttgacaatagaagagagcgtccgtcgcagaacacattattcacaaggc
aggtctggatcagaaggaaatgcttttagacgctaa
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