KEGG   Theobroma cacao (cacao): 18603170
Entry
18603170          CDS       T02994                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18603170
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    18603170
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX ResIII zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 zf-RING_4 KinB_sensor Baculo_IE-1
Other DBs
NCBI-GeneID: 18603170
NCBI-ProteinID: XP_007035047
UniProt: A0AB32V9Q5
LinkDB
Position
4:complement(28893814..28900378)
AA seq 1125 aa
MEAMDIDTVEDKKIQQSQSVADNNVVSVVKLLPNDPDSCLQSNTVSRMVTATGFRVSSLI
GSRDQFEESEPVKTQVKEEPLSKVKEEPDLGLQRNVLMKEDSGIKVKEEPDLGFDIKFPV
KEETASGCREEAVAEKFDSKSRMSFDEFLQFTNTKVQSLDDSVKTQIKEESPGPVSVAQV
KACENAKVKSENKNSRLVKKEPGFECSEGLGKPTDVKKEGFEERRVNGVLVEDGEFPEDP
DWYLVGRTMVNAVSTTKGKNKLLDNEIVYFTFPSPAASHKLQSIVRFSTKRCGVIGRLPM
DWGKWVNPLVYSNKVKVIGRCIAAPTTLSIMQEIMLFVSFYIHSSIFTEGDKSSWMFDAP
WKMESTLNPLLNLFKHLNLRPYQKADFTPEELSSGKRVLHIEDDYGEAEGALPIAKRRKS
CLEQNKDEQDISEASFNKIFGSADAYSLEEMEPPYTLTCDLRPYQKQALYWMSESEKGID
AEKAAQTLHPCWSAYSICDERASSIYVNVFSGEATVHFPSARQMARGGILADAMGLGKTV
MTIALILARLGRGNPANEKPDSRNADDSRSTNKKKDAHANTPRRAMGGTLIICPMALLSQ
WKDELETHSRPESISIFVHYGGERTNDPRVISENDVVLTTYGVLTAAYKSDAENSIYHKV
DWYRVVLDEAHTIKSSKTTGARAAFALSAHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWC
NWAWWKAEIQGPYENGNPTGLKWIKAILRLLMLRRTKETKDKEGGPILVLPPTDIQIIEC
EQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYASILELLLRLRQCCNHPFLVMSRADS
QQYSDLNKLARRFLETLPHSVSPDQNAPTRAYIEEVVDGIRRGENRECPICMESADDPVL
TPCAHRMCRECLLSSWRTPTVGLCPICRTVLKKSDLITCPTDSKFRVDIKKNWKESSKVS
KLLECLERIRRSGSGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRFDGRLVQKQRENVLKE
FRETGDKMVLLMSLKAGGVGLNLTAASNVFLVDPWWNPAVEEQAIMRIHRIGQKRAVSVR
RFIVKDTVEERMQQVQARKQKMIAGALTDEEVRSARIEELQMLFR
NT seq 3378 nt   +upstreamnt  +downstreamnt
atggaggccatggatatagacacagtggaagacaagaagattcaacaaagccaatcagtt
gcagataacaacgttgtttctgtcgttaagttgcttcctaacgaccctgattcatgtctc
caatcaaacactgttagtcgaatggtaaccgcaactgggtttcgggtttcttccctgatc
ggctcacgtgatcagtttgaagaatctgagcccgttaagacccaagtgaaggaggagcct
ctgtcgaaagttaaggaagagcctgatttgggtcttcagagaaacgttttgatgaaagaa
gatagtgggattaaagtaaaggaggagcctgatttggggtttgacattaagtttccagtg
aaggaagaaacggcttcgggttgcagggaggaagccgttgccgagaagtttgattcaaag
tcaaggatgtcttttgatgagtttcttcagttcacaaatacaaaggttcaatctcttgat
gactctgtcaaaactcagatcaaagaagagtctcctggtcctgtttctgttgctcaggtc
aaggcctgtgaaaatgcaaaggtgaaatcagaaaataaaaactctcggttggtgaaaaag
gaacccggttttgagtgttctgaaggattgggaaaaccgactgatgtaaagaaagagggt
tttgaagagagaagagtgaatggtgttttggtggaagatggggagtttcctgaagatcca
gattggtatttggttggaaggacgatggtcaatgcagtttcaacaactaaagggaagaac
aaattgctagataatgagattgtttacttcactttcccttctccagcagccagtcacaag
cttcagtctatagttcgcttctcaactaagcgctgtggagtgattggtcggcttccaatg
gattggggtaaatgggtaaatccccttgtatattccaataaggttaaagttattggtcgg
tgtatagctgctccaacaacacttagtattatgcaagaaatcatgctatttgtaagcttc
tacattcacagttctatattcacagagggtgacaagtcttcatggatgtttgatgcacct
tggaagatggagtctacgcttaaccctctgcttaatctattcaaacacctgaatttgaga
ccatatcagaaggctgacttcactccagaggaactgagttctggcaagcgtgttctccat
atagaagatgattatggtgaagcggaaggagctttgcccatagcaaaacgaagaaagagt
tgtttggagcagaataaagatgaacaagatatttcagaggcatcttttaataagattttt
ggttctgcagatgcatacagtttggaggaaatggagcccccatacacactcacatgtgat
ttgagaccgtaccagaaacaagctctgtactggatgtctgagtcggagaaaggaatagat
gctgagaaagcagcacaaactcttcatccatgctggtctgcttatagcatatgtgacgaa
agggcttcctcaatctatgtaaatgtgttctcaggagaagccacagttcatttccccagt
gctaggcagatggccagaggaggaattctagcagatgcaatgggtcttggaaagactgtg
atgacgattgcgctaatccttgcaagacttggtagaggaaatcctgctaatgaaaaacct
gattccaggaacgcggatgatagcagaagcacaaacaaaaagaaagatgctcatgcaaac
accccacgtagagcaatgggaggcactcttattatttgtcccatggctttgttaagccaa
tggaaggatgagcttgagacccactcaaggcctgaaagcatatcaatttttgttcactat
ggtggtgaaagaaccaatgatcccagggttatctcagagaatgatgtggtcttgacgaca
tacggggtcttaactgctgcttataaaagtgatgccgagaacagcatttaccacaaggtt
gactggtatagggtggtcttagatgaagctcatacaattaaatcctcaaagaccacagga
gctcgagctgcatttgcattgtctgcacactgccgttggtgtctcactggaaccccgctt
cagaataatttggaagatctctacagccttctatgcttcttgcatgtggagccatggtgc
aactgggcatggtggaaggcagagattcaaggaccttatgagaatggtaatccaacagga
ttgaaatggatcaaggctatattacggctgctgatgttgagaagaacaaaggaaacaaag
gataaagaaggagggcccattcttgttctccctccaactgatattcaaatcattgagtgt
gagcagtcagaagctgaacgtgatttctatgatgctctattcaaaagatctaaagttcag
tttgatcaatttgttgcacaaggcaaggttcttcacaattatgcatccattcttgagcta
ttacttcgactgaggcagtgttgcaaccacccttttcttgttatgagtcgggctgattca
cagcagtattcagacttgaacaaacttgcaagaaggttccttgaaactctgcctcattct
gtctctccagatcaaaatgcccctaccagagcctacattgaagaagttgttgatggtatc
cggaggggtgaaaacagagagtgtccaatttgcatggagtctgcagatgaccccgtgctc
acaccttgtgctcataggatgtgcagggaatgtctcctctcaagttggcgcacaccaaca
gttgggttatgcccaatctgtaggacagtgctgaagaaaagtgacctcataacttgtcca
actgatagcaagtttcgagtagacattaagaagaactggaaagagtcttcaaaggtttca
aagctgttagagtgcttggaacgcattcgccggtcaggttctggtgagaagagcattgtg
tttagccagtggacttcatttctagatctcttagaaatcccattaaggaggagaggaatt
ggattcttaaggtttgacggaagactggtgcaaaaacaaagggagaatgttctgaaggag
ttccgcgagacaggagataaaatggttttgcttatgtctttgaaagctggtggcgtgggc
ctgaacttaactgcagcctctaatgtcttcttagtggatccatggtggaatcctgcagtg
gaggaacaagcaattatgcgaattcatcgtattggacaaaagagagcagtctctgttaga
aggttcattgttaaggacacagtggaggaacgcatgcagcaagttcaggccaggaagcag
aagatgattgctggtgccttgactgatgaagaagtcagatcagccaggattgaagagctg
cagatgcttttcagatga

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