Theobroma cacao (cacao): 18603348
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Entry
18603348 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18603348
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18603348
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Helicases
18603348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
18603348
NCBI-ProteinID:
XP_017975356
UniProt:
A0AB32WBU4
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All DBs
Position
4:29808317..29814448
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AA seq
808 aa
AA seq
DB search
MAAVSPPQQQEQESASLSKKRKQKRKRRVHDPELERLDSLPWNSSLRDKEEDDTFSLFIG
SGDLDGGFLSLEEIDEANYGLDVPGPKKKVSDKKSKSKKEKLKEVTKGSAEDVEAEPADE
MAEEKNAKAKKKKKKNKKRKAKTAQQGEESTVVSDGKDDEEEEMLEEAEAYSEFYAWNEL
RLHPLLMKSISRLGFKEPTPIQRACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLE
EREKAANMIQEKGEEAEKFAPKGVLRALIITPTRELALQVTDHLKEVSKGINVRVVPIVG
GMSAEKQERLLKTRPEIIVGTPGRLWELISEGEKHLVELHSLSFFVLDEADRMVEAGHFR
ELQSIIEMLPMTTGVTKGQSQNTQNCVTVSSLSRKKRQTFVFSATLALSADFRKKLKRGS
LKSKQPAEGLNSIEILSERAGMRPNAAIIDLTNASILAKNLEESFIECREEDKDSYLYYI
LSIHGEGRTIVFCTSIAALRHISSLLRILGINVSTLHAQMQQRARLKAIDRFRANEHGIL
VATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASSDGCSIALISPNDSSKFAS
LCKSFAKESIKQFPLENSYLPEVMKRLSLARQIDKILRKDSQERANKSWLERSAESLELV
MENYDSEEERVNNFKQKKASSNQLKKLQQELNLLLSRPLRPKSFSHRYPAAAGVTHLIQH
QFEELAKQNVGGNLVSGENKRRKLMVIGQDCMEPLQALRNAGHEVHMDVKEMAEKRRNVE
SLRRKRKEEKKRLRDQRRKQKKKLEGRQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgtcaccgccgcaacaacaagaacaagaatcggcttcactttcaaagaag
agaaagcaaaagagaaagagaagagtacatgacccagaactcgaacgacttgactcgctc
ccttggaactcttctcttcgcgacaaagaagaagatgacactttctctctcttcattggc
tctggggaccttgatggaggttttctttcccttgaagagattgacgaagctaattatggt
ttagatgtacctggacctaagaagaaagtatctgataaaaaatcaaaatccaagaaagag
aagctaaaagaagtcactaagggttctgctgaagatgttgaagctgaacctgcagatgaa
atggcagaagagaagaatgcgaaggctaaaaaaaagaaaaagaagaataagaagagaaag
gcaaaaacagctcaacaaggagaggaatctacagttgtcagtgacggcaaagatgatgag
gaagaagagatgcttgaggaagctgaagcttactctgaattttatgcgtggaatgagttg
aggcttcatcccctgcttatgaaatcaatatctcggcttgggttcaaggaaccaactcca
atacagagagcttgtattccagctgcagctcatcaagggaaggatgttattggtgctgct
gaaactggatctgggaaaacactagcatttggcctgcccattctccaacgtctcttagaa
gaacgggaaaaagctgcaaacatgattcaggagaagggggaggaagcagaaaagtttgct
cctaaaggtgttttacgagctcttattatcactcctactagggaacttgcactccaggtt
actgatcatcttaaggaagtttcgaagggtatcaacgttagagtggttcctattgttggt
ggcatgtcagcagagaagcaggaacgtctattgaaaacaaggcctgagataattgttgga
actccagggagattatgggagcttatctcagagggggaaaaacatcttgttgagttacat
tcattgtctttctttgtgctggatgaggctgatcgaatggttgaagcggggcatttccgt
gagttacagtcaataattgaaatgcttcctatgaccactggtgttaccaaaggacaatct
caaaacacacagaattgtgtgacagtttcaagcttatcaagaaagaaaagacaaacattt
gttttttctgcaactttagcactttctgctgattttcgcaagaagctaaagcgtggttca
ttaaaatccaagcagcctgctgaggggctgaattctatcgaaatcctatctgagcgagca
ggaatgagaccgaatgctgccattattgatctgacaaatgcatcaattttagcaaagaac
cttgaggaatcttttattgaatgcagggaagaagataaagattcctatttgtattacatt
ttgagcattcatggagaagggcgaacaattgttttctgtacatcaattgcagctttgcgt
catatttcttccctcttgcgcatcctgggcattaatgtttcaacacttcatgctcagatg
cagcagcgagctcgcttgaaggccattgaccgttttcgtgcaaatgaacatggcattctt
gttgccactgatgttgcagcaaggggccttgatattcctggtgttcgaactgttgtccac
tatcagcttcctcattcagcagaagtttatgtacatagaagtggaagaactgctagggcc
tcgtctgatgggtgcagcattgctcttatctctccgaatgattcctcaaagtttgcatct
ctgtgcaaatcatttgctaaggaaagcatcaaacaatttcctttagagaactcgtacttg
ccagaggtcatgaaacgtctatctctagcacgccaaatagacaagatcttgcggaaggat
tcccaggaaagggcaaacaaaagctggttggaacggagtgcagagtcattagaattagta
atggagaattatgacagtgaagaggaaagagtgaacaatttcaagcaaaagaaagccagc
tccaatcaattaaagaagttacagcaggagctcaatttgttgctttcacgaccgttacgt
ccaaaatcattttcacatcgctatccagctgcagctggtgttacacatcttatacaacat
caatttgaagaattggctaagcaaaatgtaggtggcaacttagtttctggtgaaaacaag
agaaggaagttgatggttattggtcaagattgcatggaaccactccaggcacttcggaat
gctggtcatgaggtgcacatggatgtgaaagagatggcagaaaagcgaagaaatgtggag
agtttgaggagaaaaagaaaagaggagaagaaacgtttgcgtgaccagcgtagaaagcag
aagaaaaaattagaagggagacagtga
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