Theobroma cacao (cacao): 18603402
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Entry
18603402 CDS
T02994
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18603402
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18603402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
18603402
NCBI-ProteinID:
XP_007035423
UniProt:
A0AB32VC21
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Position
4:complement(30029258..30033976)
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AA seq
471 aa
AA seq
DB search
MSRLRKDVNACNEGNALSRTCARQGCSENSGYLDHDIFQLTNLRSGPHDLLSRGVPGRMK
LPVSTLKMLVGREGNYTGRGRFTSADSCHVLSRYLPVNGPWWVDQVKSRAYVSQFSADGS
LFVAGFQRSHIRIYNVDRGWKVKKDIMAKSLRWTITDTSLSPDQRFLVYASLSPIVHIVN
VGSAATESVANITEIHDSLDFAGDHDDDDGFGIFSVKFSTDGRELVAASNDNSIHVYDLE
AKRPSLLIPAHKSDVNTVCFADETGHLIFSGSDDHLCKVWDRRCFVTKGKAAGVLMGHLE
GITFIDSRGDGRYFISNGKDQTTKLWDIRKMSSNAAYTPRLRDPEWDYRWMDYPTHARAL
KHPHDQSIATYRGHSVLCTLIRCYFSPSYSTGQKYIYTGSSDGSLFIYDLVSGAQVASHH
HHDAPVRDCSWHPFYPMMITSSWDGVIARWEFPGGNEEPSRWEPNHRGPFF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcttcggaaggatgttaatgcttgtaatgaagggaatgcccttagtagaact
tgtgcaagacaaggttgtagtgagaattctggttaccttgatcatgatatttttcaactc
acaaaccttagatcaggaccccatgaccttttgtcccggggtgtgccaggcaggatgaaa
ctacctgtttctacgttgaaaatgttggttgggcgagagggtaattatacgggaagaggt
agatttacatcagctgatagttgtcatgttttaagccggtatttgcctgtcaatggtccc
tggtgggtggaccaggtgaaaagtcgcgcatatgtctctcagttttcagccgatggttct
ctttttgttgctggattccagagaagccacattaggatatataatgtggacaggggatgg
aaagttaagaaggacatcatggctaaaagcttgagatggacaattactgatacctctctt
tcaccagatcaacgttttcttgtgtatgctagtttatcccctattgtccacattgtgaat
gttggatccgctgcaacagagtcagttgcaaacattacagaaattcatgacagtttggat
tttgctggtgatcatgatgatgatgatggattcgggatcttctctgtgaaattttctact
gatggaagagagcttgtagcagcaagcaatgataattctatacatgtttatgatcttgag
gcaaaaaggcctagcctcctaatcccagctcacaagtctgatgtcaacactgtgtgcttt
gcagacgaaactgggcatctcatattttctggcagtgacgatcatctttgtaaggtgtgg
gacaggcgttgctttgtcactaaaggaaaagcagctggggtcttgatgggacacctagaa
ggcattacattcattgatagccgtggagatggccgttattttatttcaaatggcaaagat
cagaccacaaaactctgggatatacgaaagatgtcctccaatgctgcatacactccaagg
ctaagagatcctgagtgggactacagatggatggattacccaactcatgcaagagccttg
aaacatccccatgatcagtcaatagcaacatacagaggccattcagtgttgtgtactttg
attcgttgttacttctctccatcgtatagcactggtcaaaagtacatttacactggctct
agtgatggttctctttttatatatgatttggtgagtggagctcaagtagcaagtcatcac
catcacgacgctccagtgagagattgtagttggcatccgttctatccaatgatgatcacc
tcctcctgggacggtgtcattgccagatgggaatttcccggcggcaatgaagaaccctca
cgatgggagccgaatcatagaggacctttcttttga
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