Theobroma cacao (cacao): 18603656
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Entry
18603656 CDS
T02994
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18603656
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_3
PAS_8
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
18603656
NCBI-ProteinID:
XP_007035807
UniProt:
A0AB32V9R1
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Position
4:31242589..31248693
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AA seq
1138 aa
AA seq
DB search
MASGGRAVHSQHQQQQQQAQSSGTSNMRAPRGHNHQADSVSKAIAQYTVDARLHAVFEQS
GETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMAVDEPSFRVIAYSEN
AREMLGITPQSVPNLEKTEVLTIGTDVRTLFTPSSATLLEKAFGAREITLLNPVWIHSKN
SGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL
CDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESKRPDFDPYIGLHYPASDIPQASRFLF
KQNRVRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVI
INGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQL
SEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQI
KNIVEWLLEFHGDSTGLSTDSLADAGHPGAASLGDAVCGMAVAYITKRDFLFWFRSHTAK
EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFR
DTEASNSKAVVHAQLGELELQGVDELSSVAREMVRLIETATAPIFAVDVEGLINGWNAKV
AELTGLSVEEAMGKSLVHDLVYKEYQETVDKLLSRALQGEEDKNVEIKLRTFGSEGHKKA
IYVVVNACSSKDYKNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFA
SDENTCCLEWNTAMEKLTGWTREEIIGKMLVGEVFGSYCRLKGPDALTKFMIVLHNAIGG
QEADKFPFSFFDRNGKFVQALLTANERVNMEGQVVGAFCFLQIASPELQQALKVQRQQEK
KCFARMKELTYICQEIKSPLNGIRFTNSLLEATELTEDQKQFLETSAACEKQMLKIIRDV
DVESIEDGSMELERADFYLGSVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQAR
IQQVLADFLLNMVRHAPSAEGWVEIHVRPNLKRISDGLTIVRTEFRMVCPGEGLPPELVQ
DMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPVPRRGSKSVD
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgggggcagagcagttcactcccagcatcagcagcagcagcagcaagctcag
tcttcgggcaccagcaacatgagggcgccccgcgggcataaccaccaggctgactccgtc
agcaaagccattgctcagtacacggttgacgctcgactccatgctgttttcgaacaatct
ggggaaaccggtaagtcctttgattactcccaatccgttagaaccaccacccaatccgtt
ccagaacaacaaatcacagcttatctgtctaaaatccaaagaggcgggcacatccagcca
tttggctgcatgatggcagttgacgaacccagtttccgcgtcatcgcgtacagcgaaaac
gcccgtgagatgcttggaataacccctcaatctgttcccaatttggagaaaaccgaagtg
ctcacaattgggactgatgttcgcacccttttcacaccttccagcgcaactctgttagaa
aaagccttcggggcgcgcgaaatcacgttgctgaatccggtttggattcactctaagaac
tcagggaaacccttttacgctattttgcataggattgatgttggaattgtgattgatttg
gaacctgctagaacagaggaccctgccctgtctattgcaggggctgtccagtcacaaaaa
ttagctgtccgtgcaatttctcagttgcaatccctccccggtggcgatattaaactcttg
tgtgatactgttgtggagagtgttcaagagcttaccggatatgatagggtaatggtttat
aagtttcatgaggatgagcatggggaggttgtggctgagagtaaaaggcctgactttgat
ccttacattggcttacattatcctgcatctgatattcctcaggcgtcgaggtttttgttt
aagcagaacagagttaggatgatagtggactgccatgccacgcctgtgcgtgtggttcag
gatgatgggttgatgcagcctctgtgcttggttggttccactcttcgtgctcctcacggt
tgccatgctcagtatatggctaatatggggtcaattgcttctttggcaatggcagttatt
atcaatggaaatgatgaggaagctattgggggaagaaattcaatgaggctttggggtttg
gttgtttgtcatcatacttctgctcgttgcattccatttccccttcgatatgcttgtgag
ttcctaatgcaagcgtttggacttcaattgaatatggaattgcaattggcatctcagttg
tcggagaaacgtgttttaaggactcaaactcttttgtgtgatatgcttcttcgtgactct
ccaactgggattgttactcaaagtcccagcattatggatcttgtgaaatgtgatggggct
gctctttattaccaaggtaaatactacccattaggtgtgacgccaactgaggcccagata
aaaaatattgtcgagtggttgttggaattccacggagactcaacaggtttaagcacagac
agtttggctgatgctggccaccctggggcagcctcacttggggatgcagtttgtgggatg
gctgttgcctatatcactaaaagggattttctattttggttccggtcccacacagcaaaa
gagattaagtggggtggtgcaaagcatcacccagaggacaaggatgatggacaaagaatg
cacccacggtcttcattcaaggcatttctggaagtggtcaaaagtcggagtttgccatgg
gagaatgcagaaatggatgcaattcactcactgcagcttattctgcgtgactcattcagg
gatactgaagcaagcaattctaaagctgttgtacatgctcagcttggggaactagagcta
caaggagtggatgaactcagctcagttgcaagagaaatggtgaggttaatagagactgca
actgctcccatatttgctgtagatgttgaaggtctcattaatgggtggaatgcaaaggtt
gcagaactgacagggctctcagttgaggaagccatggggaagtctttggttcatgatctt
gtttacaaggaatatcaagaaactgtcgacaagcttcttagtcgtgctttgcaaggtgaa
gaagataaaaatgtagagataaaattgaggacttttggctcagaaggtcataaaaaggct
atatatgtggtggtcaatgcttgctccagtaaggattataaaaataatatagttggagtt
tgctttgttggtcaggatgttactggtcaaaaggtggtgatggacaaatttatccacata
caaggtgattataaggccattgttcatagtcccaatcctttgatcccacccatttttgct
tcagatgaaaacacatgttgcttggagtggaacacagccatggaaaagctcactgggtgg
actcgagaggaaatcattggaaaaatgttggttggtgaggttttcggcagttactgtcgt
ctcaagggtccagatgctttgacgaaattcatgattgttttacacaatgccattggaggg
caggaggcagataagttccctttttccttctttgaccgcaacgggaaatttgtgcaggca
ctcttgacagcaaatgaaagggtcaatatggaaggccaggttgtaggagccttttgcttc
ctgcagattgcaagtccagagttgcagcaagcactgaaagtccagaggcaacaggaaaag
aagtgctttgctaggatgaaagagttgacctacatttgccaggagattaagagtcctttg
aatgggatccgctttactaactcacttttggaagctacagaactgactgaagatcaaaag
cagtttcttgagactagtgctgcttgcgagaagcaaatgttgaagattataagagatgtt
gatgtggagagcattgaggacggttctatggagcttgaaagggctgacttttatcttggg
agtgtcataaatgctgttgttagccaagtaatgctactgctgagggaaagaaatctgcag
ttaattcgggatattcccgaggagatcaaaactctggctgtttatggtgatcaggcgaga
atccaacaggtattggccgattttttgttgaatatggtgcgtcatgcaccatctgccgaa
ggttgggtagagattcatgttcgtcccaatttgaagcgaatttctgacggactcactatt
gtgcgtactgaattcaggatggtatgccctggtgaaggtcttcctcctgaattggttcaa
gacatgttccatagcagtcgatggatgacacaagaaggcttagggttgagcatgtgccga
aaaatcttaaagcttatgaatggtgaggtccaatatatcagagaatcagaaagatgttat
ttcttaatcatcctcgaacttcctgtacctcggagaggctcaaagagtgttgactag
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