Theobroma cacao (cacao): 18603715
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Entry
18603715 CDS
T02994
Name
(RefSeq) nuclear export mediator factor NEMF homolog
KO
K24971
nuclear export mediator factor NEMF
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18603715
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
18603715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_1
NFACT-C
NFACT_N
zf-CCHC
DUF5590
Motif
Other DBs
NCBI-GeneID:
18603715
NCBI-ProteinID:
XP_017975184
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All DBs
Position
4:31509914..31516097
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AA seq
1109 aa
AA seq
DB search
MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGITESGESEKVLLLM
ESGVRLHTTAYVRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGANAHYV
ILELYAQGNILLTDSSFTVLTLLRSHRDDDKGFAIMSRHRYPTEICRHFERTTISKLQAA
LTSASEPVENEATKVNEAGNNLPDARKEKEKQDSRKGGKPSESNKKASDNTRAKQATLKN
VLGEALGYGPALSEHIILDAGLVPSTKVTKDSKFDDDKIQVLAQAVAKFEDWLQDVISGD
KVPEGYILMQKRNPGKDGPLSEGTTDQIYDEFCPILLNQFKSRDYVNFETFDAALDEFYS
KIESQRSEQQQKSKESSASQKLNKIRLDQENRVHMLKKVVDNCVQMAELIEYNLEDVDAA
ILAVRVALAKGMNWEDLARMVKEEKKSGNPVAGLIDKLYLERNCMTLLLSNNLDEMDDDE
KTLPVDKVEVDLALSAHANARRWYELKKKQESKQEKTVTAHEKAFKAAERKTRLQLSQEK
TVASITHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHADLHGAS
STIIKNHRPEQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTV
GSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEGINDVEETGPLIEN
SESGSEKGDEAIDVPELAVEGRTGLNDVGNANISDVVDGGVASVSPQLEDLLDRTLVLGS
AAVLGKNSVLGTSQIDLVEEDNHEEKKATVRDKPYISKAERKKLKKGPSSNDVNASIEKG
NKKAKENGNAVSQPENNVGNKKPGGGKISRGQRGKLKKIKKYADQDEEERSIRMALLASS
GKGNKNDGGLDDANATTNNNQKPAASAPEDAPKICYKCKRAGHLSRDCPEHPDDTLHDHA
NGIGDNRHAGLHESDELDRVVMEEDDVHEIGEEEKGRLNDVDYLTGNPLPSDILLYAVPV
CGPYSAVQSYKYSVKIIPGTAKKGKAAKTAMNLFSHTPEASNREKELMKACTDPELVAAI
IGNVKITAAGLTQLKQKQKKGKKSNKGES
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggtgcgcatgaacacggccgatgtggccgccgaagtcaagtgcttgcgaaga
ttgatcggcatgcgctgttccaacgtctacgatctctcgcccaagacgtatgtattcaag
ctgatgaatagcagcggcattacagagtcgggagagagcgagaaggttttgttgttaatg
gagagcggtgtccgattgcataccactgcttatgttcgggataagagtaacactccttct
ggctttactctcaaattacgaaagcatattcgaactagaaggcttgaagatgtacggcag
ctcggttatgataggataatccttttccaatttggattaggtgctaatgcacattatgta
atattggaattgtatgcccaaggaaacattctcctcactgattcttctttcacagtcttg
actcttcttcgttcacatagggatgatgataaagggtttgcgatcatgtcacgccatcgt
tatcctactgagatttgccggcattttgagcgaactaccatttcaaagctgcaggcagcc
ctcacttctgctagtgaacctgttgagaatgaagccactaaggttaatgaagccgggaat
aatttgcctgacgcacgaaaagaaaaagaaaagcaggatagtcgcaagggtgggaaacct
tctgagtcaaacaaaaaggccagtgataacactcgtgctaaacaagctacattgaagaat
gttctcggggaggcattgggttatgggcctgcactttctgagcatattattttagatgct
ggcctggttccaagtacaaaagttaccaaagatagcaagtttgatgatgataaaattcaa
gttttggcccaagctgttgcaaaatttgaggactggttacaggatgttatatcaggtgac
aaggttcctgaaggatacattttaatgcagaaaaggaatccaggaaaggatggcccactg
tccgaaggaactactgatcagatatatgatgaattctgccctattttattgaaccagttc
aagtcaagagactatgtgaattttgaaacatttgatgcagctttggatgaattctacagc
aaaattgagagccaaaggtctgagcaacagcaaaagagcaaggagagctctgcgagtcag
aaattaaacaagattcgcttggatcaggaaaatcgtgttcatatgctgaagaaagtagtt
gataattgtgtccaaatggcagaattgatagagtacaacctagaagatgtggatgctgcc
atattagctgttcgtgtagctcttgcaaagggtatgaattgggaggatcttgctcgtatg
gtgaaggaagagaagaaatctggaaatcctgtggctggcctaattgacaagctctatctt
gaaaggaattgcatgacattactactgagcaacaatcttgatgaaatggatgatgatgaa
aagacactcccagtggataaggttgaagttgatttggcactttcagctcatgccaatgct
cgacgttggtatgaattgaagaaaaagcaagagagcaaacaggaaaagactgtcacagca
catgagaaggcttttaaggcagctgagagaaagactcgtcttcagctttcacaggaaaaa
actgttgcatcaattacacatatgcgcaaagttcattggtttgagaaatttaattggttc
atcagcagtgaaaactatttagttattagtggacgtgatgctcaacagaatgagatgatt
gtcaagagatatatgtcaaaaggggatctgtatgtccatgcagatttgcatggggcttct
agtacaataatcaagaatcacaggcctgagcagccagtaccacctctcactttaaaccaa
gctggatgttttacagtttgtcacagccaggcatgggattcgaaaattgttaccagtgct
tggtgggtttatcctcaccaggtcagtaaaactgctcctacaggggaatatcttactgtt
gggagtttcatgatacgcgggaagaagaactttcttcctccacatcctcttataatggga
tttgggttattgtttcgcttggatgaaagctccttgggatcacatttaaatgaaaggagg
gtgaggggtgaggaggaagggataaatgatgttgaagaaactggtcctctcatagaaaat
tctgagtcaggatcagagaaaggtgatgaagcaattgatgtacctgaattagcagttgaa
ggcaggactggcttgaatgatgttggtaatgcaaatatatctgacgttgtggacggtggt
gttgcttctgtcagtccgcaacttgaggatctccttgatcgaactctagtgcttggatct
gctgctgtcttgggtaaaaattctgttcttggaacttcgcaaattgatttggtagaggaa
gataatcatgaagagaagaaagctacagttagggataagccttatatttcaaaagctgaa
agaaaaaagctcaagaaaggaccaagcagtaatgatgttaatgctagtattgagaaggga
aacaagaaggcaaaagagaatggtaatgctgttagtcaacctgaaaataatgtgggaaat
aagaaaccaggtggtggaaaaataagccgtgggcagagaggcaagctcaagaaaataaag
aagtatgctgatcaggatgaggaagagaggagcattcggatggcattactggcttcttca
gggaaaggtaacaagaatgatggagggttagatgatgcaaatgctactaccaacaacaac
cagaaaccagctgctagtgctcctgaagatgccccaaagatatgttataaatgcaaaagg
gcaggtcatctttctcgggattgtcctgaacatcctgatgatactttgcatgatcatgca
aatggaattggagataatcgccatgcaggtttgcatgaaagtgatgagttggacagggtg
gtcatggaggaagatgatgtccatgagataggcgaagaagagaaagggagattaaatgat
gtggattacttgaccggaaatcctctgccgagtgatattctcttatatgctgtgcctgtc
tgtggtccttatagtgcagtgcaatcatataaatacagtgttaagataatacctggcact
gcaaagaaaggaaaagctgcaaagactgccatgaatctgtttagccacacgccagaagca
agcaacagagagaaggaattgatgaaagcatgcacagatcctgagctagttgctgcaatt
atcggcaatgtgaagatcacagctgctggtctcactcaactgaaacagaagcaaaagaag
ggcaagaagagtaacaaaggagaaagctaa
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