Theobroma cacao (cacao): 18603876
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Entry
18603876 CDS
T02994
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18603876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcc04040
]
18603876
Ion channels [BR:
tcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18603876
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
18603876
NCBI-ProteinID:
XP_017972341
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Position
3:539251..545145
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AA seq
694 aa
AA seq
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MNNLHLYASSRFRHLPKTFSLRREVPWWDQILDPGSQIVTKWNYIILVTCLIALFLDPLY
FYLPVIAGPACMSIDLGLGIIVTFFRTVADLFFLMHIILKFRTAFVAPNSRVFGKGELVM
DPRAIAIRYLKSSFAIDLAAALPLPQIVIWFIIPAAKSPSAAHANHTLSFIVLIQYVPRF
FIMFPLNQRIIKTTGVVAKTAWSGAAYNLLLSMLASHVLGSSWYVLSIQRQYQCWRMECA
KEMNATHSPSCNPLFLDCSTIGKPERNFWLKVTRVITSCDAKNDDNNDFQFGMFSDAFTN
DVASADFLDKYFYCLWWGLKNLSSYGQNIVTSTLSGETLFCILICIIGLVFFSHLIGNMQ
TYLQSTTARIEEWRVRRRDTEEWMRHRQLPPDLQDRVRRFVQYKWIATRGVDEEAILKSL
PLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTNDMYLVREGDPVNEML
FIIRGRLESSTTNGGRAGFFNSITLGPGDFCGEELLTWALVPASTSELNLPLSTRTVKSL
TEVEAFALRSRDLKFVAKQFKRLHSKTLQHAFRYYSHQWRTWGACFIQAAWRRFKRKKQA
MELAKQENLYYTQDNEDGYSEGSAAAEYDDGGAASADNANNSQHLGATILASKFAKNTRK
GTKKITRIDPDDSSLKLPKMFKPVEPDFSADHDS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctccatttgtacgcctcctcccgcttccgccacctccctaagaccttctct
ctacgccgcgaagttccgtggtgggatcaaatcctcgatccgggaagccaaatcgtgacc
aaatggaactacatcatcctcgtgacatgcctcatagccttgtttttggaccctctctat
ttttacctgccagtcatcgctggccctgcctgcatgagtatcgatttaggcctaggaatc
attgtcacgttcttccgtacggtggcagacttgttcttcctcatgcacatcatcttaaaa
tttagaacggctttcgtggcacccaattccagggttttcgggaagggagagctggtgatg
gatcccagggccatcgccatccgctacttgaagtcaagttttgccattgatcttgctgct
gcgctccctctcccacagattgtcatttggttcataattccagcagcaaaaagtccatcg
gctgctcatgctaaccacacgctttctttcattgttctcattcaatatgttcctcgattc
ttcatcatgtttcctctgaaccagcggataattaaaactactggcgttgtggctaagact
gcttggtcaggtgcagcatacaatctacttctgtctatgctggctagccatgtcttagga
tcttcatggtatgtgttgtctattcaacggcagtaccagtgctggagaatggaatgtgct
aaggagatgaatgctacccactcaccatcatgtaatcctttattccttgattgtagcacc
ataggaaagcccgaacgtaacttttggctcaaggttactcgtgtgatcactagttgcgat
gctaagaatgatgacaacaacgattttcagtttgggatgttttctgatgctttcaccaac
gatgttgcttcagcagatttccttgataaatatttttattgcctttggtggggtttaaaa
aatttgagttcatatggacaaaatattgtgactagtacacttagtggagaaacattattt
tgcattcttatttgtatcattggtctagttttcttctcacatctcataggcaacatgcag
acctatcttcaatctacaacagcaagaatagaagagtggagggtcagacgaagagatact
gaagagtggatgagacacaggcaattgccaccagatttgcaggaccgtgttcgccggttt
gttcaatataaatggattgccacaagaggtgttgatgaagaagccatattgaagtcccta
cccttggatctcaggcgtcaaattcaaaggcatctctgtcttgcccttgttcgccgagtt
cctttttttgctcaaatggatgatcagctcctcgatgccatatgcgaacgccttgtccct
tccttgaacaccaacgacatgtacttggttcgggaaggtgatcctgtgaatgagatgctt
ttcatcattagaggcagattagaaagctctacaaccaatggcggtagagcaggatttttc
aattccattaccctgggacctggtgacttttgtggtgaagagttgctgacatgggccttg
gttccagcctctacctctgagttaaaccttccattatcaaccagaacagtcaagtccctg
actgaagttgaggcctttgctctccgctccagggacctcaaatttgtagccaaacaattc
aagcgcctccatagcaagacactgcaacatgctttcaggtactattcccaccaatggagg
acttggggagcttgctttatacaagctgcttggagaaggttcaagaggaagaagcaggca
atggagctggcaaagcaggagaacttgtactacacgcaagacaatgaagatggctacagt
gagggatcagctgctgcagaatatgatgatggtggtgctgcatcagctgataatgcaaac
aactcccagcatcttggtgccacaattctggcttctaaatttgctaaaaacactagaaaa
ggaaccaagaagataactaggattgaccctgacgactctagcttaaaattgcccaaaatg
tttaagcctgtggagcctgatttctctgcagaccatgatagttaa
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