Theobroma cacao (cacao): 18603938
Help
Entry
18603938 CDS
T02994
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18603938
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18603938
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18603938
03036 Chromosome and associated proteins [BR:
tcc03036
]
18603938
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18603938
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18603938
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18603938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
18603938
NCBI-ProteinID:
XP_007036267
UniProt:
A0AB32VBN2
LinkDB
All DBs
Position
3:998910..1005921
Genome browser
AA seq
512 aa
AA seq
DB search
MNLMSTRQPSTRASPPAPLDWKFSQVFGERSAGEDVQDVDRISAVEFEKSGDYLAVGDRG
GRVVIFERKDGKATPDEHYSRSQLERLDFVSLDHPEYQYKTEFQSHEPEFDYLKSLEIEE
KINKVKWCTTPNGSLFILSTNDKTIKLWKVKDRKVKKAKEVDPHQFVSSENSLLAERSFV
SEQDIPSFTNGNNLEWKENVANNTFASQELHAKIGNNEDATYARCRRVYAHAHDFNINSI
SNNSDGETFISADDLRINLWNLEISNQSFNIIDMKPLNMEDLTEVITSAEFHPIHCNLLA
YGSSRGFIRLVDMRQSALCDYSARILQDAECQGSRSFFTEIVASISDIKFSVDGRHILSR
DYMDLKLWDINMDSSPVATFKIHEHLRPKLCDLYNNDSIFDKFECCLSGDGLHFATGSYS
NLLRIFSHGVGSEEGSTVEASKNPNSRKPLQRARRSSLSNLTRGFHKQGHENTSLGNEFS
WSSSSKLQHVAWHPCANLIACASGNSLFFYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgatgagcacgcgccagccttccactcgcgcttctcctccggctcctctggat
tggaagttctctcaagtcttcggcgaaagaagcgccggcgaagatgttcaagatgttgat
agaatatcggcggttgaatttgagaagagcggtgattaccttgctgttggagatcgaggc
ggccgggttgtaatattcgagagaaaggacgggaaagctacaccggacgagcactattcc
agaagtcagctggagcggttggattttgtctctttagaccatcctgaatatcaatataag
actgaatttcagagtcatgagcctgagtttgattacttgaagagcttggagattgaagag
aaaataaacaaagtaaaatggtgtacaacacccaatgggtcactctttatcctttcaacg
aatgataagacaattaaattgtggaaggtaaaggatcgaaaggtgaagaaggcaaaggaa
gtggatcctcatcaatttgtctcttcagaaaattctcttctggctgaaaggagttttgtg
agtgagcaagacataccatcttttactaatggcaataacctagagtggaaagagaatgtg
gctaacaacacattcgcatctcaagaattgcatgctaagattggtaacaatgaagacgcc
acatatgcaagatgtagaagggtctatgctcatgctcatgattttaatatcaattcaatt
tcaaataatagtgacggcgagacatttatatctgcagatgatcttaggataaacttgtgg
aaccttgaaattagtaatcagtcatttaatatcattgacatgaagccattaaatatggag
gatcttactgaggtcatcacgtcagctgaattccatccaattcattgtaacctgcttgca
tatggcagctcaagaggttttattcgccttgttgacatgcgacaatcagcattatgtgat
tacagtgctagaatattgcaggatgcagaatgtcaagggtcaagatcattctttactgag
attgttgcctctatatccgatataaagttttcagttgatgggcggcacatcttaagccgt
gactacatggaccttaagctgtgggatataaacatggattcttcaccagttgcaacattt
aagattcatgaacatctacgcccaaagttatgcgatttgtataataatgactccatattt
gataaatttgagtgctgcctcagtggagatggacttcattttgcaactggatcttatagc
aatctcttacgtatcttctctcatggtgttggaagtgaagaggggagtacagtagaagct
agcaaaaatccaaacagtaggaagccccttcagagggcaagaagatcatccttaagtaac
cttacgcgcgggtttcacaagcaagggcatgaaaacacaagccttggtaatgagttttcc
tggtcctcaagttctaagctgcaacatgtcgcttggcacccatgtgcaaacttgattgct
tgtgcttctggaaatagcttgtttttctactatgcgtag
DBGET
integrated database retrieval system
