KEGG   Theobroma cacao (cacao): 18604043
Entry
18604043          CDS       T02994                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18604043
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18604043
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 18604043
NCBI-ProteinID: XP_007036409
UniProt: A0AB32VB62
LinkDB
Position
3:1647733..1653876
AA seq 723 aa
MATTEASQSADSYVGSFISLISKSEIRYEGVLFRINPHESSIGLKNVRSFGTEGRKKDGP
QVLPSDKVYDYIYFRGSDIKDLQVLSSLSVQSVAAIPDDPAIIQSHYQHPAASSSLPHSS
TSSMTSFSSNSQLALPSSNYQGSVPQYHPVGHMVSWGSSTPPTVNSNEHTVPMYWQGLNG
PSGGYSYLHPSLLRPPPGLLASPGTQQMEHSTVDASIPSGATHLPEIPHLLLPTSSASSL
NSTLLPSSSASSQNSILFPPSSASPQNSTMQPPSSASSQNPTVLPPSSASTLNSTFVSIS
SSALHSKLPIVHAASLVSNEASNYTAYFDPNAPGLTLSSNLSLASSLTSSVDTNNIALQF
GEKSKSTLGSTSSYPNMPTPTPPIVGTSGSNQLEVPTPSLVTPGQLLQSAPTSPPRILSS
SLPLQTAQKDIEVVQTSTLEPLSTDADEAQAPMLPTASVSSGKMNEASLDSQHHDKGLVR
GRRNGPHVATSHTHRIIRGHVEERENNSNRVTLQSHHTNKVHVRGRRNGLYGTASHFQPS
NRSHTGGMEKMNGTAPRPYYGSRGRAQGRTNGISLSVTEYPTDFDFEAMNEKFNKEEVWN
QLGKSSKGTSEDNGDADDSQEDDRQHEDAEGLLKADIKPVYVKDEFFDSLSSNTFDHKPK
KGRSKFSEQKKLDAETFGGFHINRGGHGGRRAGHGGWSRGSRYGRGYEHGGRGQGRAVWS
RVT
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcaacgacggaggcttcccaatcagcggattcctacgtcggaagcttcataagcctt
atttccaagtccgaaatccggtacgaaggcgttcttttccgtatcaaccctcacgaatcc
tccattggcctcaaaaacgtaagatcttttggtacggaaggacgaaagaaggatgggccg
caggttcttccaagcgacaaagtttatgattacatatacttccgaggaagcgacattaag
gatttgcaagttttgtcttcactgtccgtgcagagtgtggcagccatacctgatgatcct
gctatcattcagtctcattatcaacatcctgctgcatcttcaagcttgccacattctagt
actagttccatgacaagttttagttccaattcacagctggcacttccaagttcaaattac
caaggcagtgtgcctcaatatcaccctgtgggacatatggtttcttggggttcttcaact
cctcccactgtaaacagcaacgagcatactgtgccaatgtattggcaaggattgaatggg
ccctcaggaggttattcttatttacacccatctttgcttcggccaccacctggcttgtta
gcatctcctgggacacagcagatggaacattccaccgtagatgcatccataccgagtggt
gcaacacacttgccagaaattcctcatctcttactgccaacatcaagtgctagctccctc
aactctacattgcttccatcttcaagtgctagctcccagaattccatattgtttccacct
tcaagtgctagcccccagaactccacaatgcagccaccttcaagtgctagctcccagaac
cccacagtgctgccaccttcaagtgctagcaccctaaactctacatttgtatcaatctct
tcctcagctttgcactctaagcttcctatagttcatgctgcttcattagtttctaatgaa
gcatcaaattacactgcatattttgaccctaatgctcctggtttaacattgagttctaac
ttgtcattagcatcttccttgacttcttctgtggatacaaataatattgctcttcaattc
ggtgagaaatctaaatcaactcttggctccacttcctcttatccaaatatgcccacacct
acacctcctattgttgggacatctggctcaaatcaacttgaggtaccaactccttctcta
gtgaccccaggccagcttttgcagtccgcacccactagtccacccagaatactttcttca
tctcttcccctccaaactgctcagaaagatattgaggtggttcaaacatcaacattagaa
ccactgtcaacagatgcagacgaggctcaggcaccaatgttgcccacagcatccgtatca
tctggaaagatgaatgaagcttctttggattctcaacaccatgacaaggggcttgtacgg
ggaagaagaaatgggccacatgttgccacctcacatactcaccgaattattaggggccat
gtggaggaaagagaaaacaattccaatagagttactttgcagtctcaccacactaataag
gtccatgtaagggggagaagaaatgggttgtatggaactgcatcacactttcaaccaagt
aacagaagccacacagggggaatggaaaagatgaatggaactgctccacgcccttattat
ggtagccggggccgtgcgcaaggaagaacaaacgggatttcactctctgttactgagtac
cctacggattttgattttgaggcaatgaatgagaaattcaacaaggaggaggtctggaat
caacttggcaaaagtagtaaaggtacatcagaagacaatggggatgcagatgatagtcag
gaagacgatagacaacatgaagatgcagaaggactgctaaaagctgacataaagcctgtg
tatgttaaggatgagttttttgattctctttcttccaatacatttgatcacaagccaaag
aaaggaaggtctaagttttccgagcagaagaaattggatgcagagacatttggcggtttc
catattaatcgtggtggacatggtggtcggagagcagggcatggtggctggtcacggggt
tctagatatggaaggggatatgaacatggtgggagaggccagggacgggctgtatggagt
cgtgtaacctag

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