Theobroma cacao (cacao): 18604204
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Entry
18604204 CDS
T02994
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18604204
04121 Ubiquitin system [BR:
tcc04121
]
18604204
Transcription factors [BR:
tcc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
18604204
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
18604204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
18604204
NCBI-ProteinID:
XP_007036625
UniProt:
A0AB32VBZ4
LinkDB
All DBs
Position
3:complement(3024904..3028936)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSFQGRNRSRNPSQSTRQEWVAGGYSSTATTVVSNSAATFNSTPNVSHTSTQNDNRYRKI
GRPTNHRRDREKERSENHVAVKKEIDPNLPQLVQEIQDKLIKSTVECMICYDTVRRSAPI
WSCSSCYSIFHLNCIKKWARAPTSVDLVVEKNQGFNWRCPGCQSVQLTSSKEIRYVCFCG
KRTDPPSDLYLTPHSCGEPCGKPLEKVLGLGAGVMKDELCPHVCVLQCHPGPCPPCKAFS
PPRLCPCGKKVITTRCSDRKPVLTCGQRCDKLLECGRHRCELICHVGPCDPCQILINAPC
FCRKKVEFVICGDMAVKGEVKAEDGIFSCSSTCGEKLRCGNHNCAEICHPGPCGDCELMP
SKIKSCYCGKTSLQEQRQSCLDPIPTCSEVCAKFLPCRVHQCDQVCHSGDCPPCSVLVTQ
KCRCGSTSRRVECYKTTLENERFTCDKPCRHKKNCGRHRCSERCCPLSNSNNLPSGDWDP
HFCHMACGKKLRCGHHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSC
QLPCSVPQPCGHSSSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKT
RQCGLHACGRTCHLAPCDISSGSEPGFRTSCGQTCGAPRRDCRHTCTAPCHPSAPCPDVR
CDSRVTITCSCGRITASVPCDAGGSTSSFNADTVYEASIIQKLPVPLQPVDSTGKKIPLG
QRKLMCDDECAKLDRKRVLADAFDITSPNLDALHFGENSVTSELLSDLYRRDAKWVLAIE
ERCKVLVLGKNRGTATGLKIHVFCPMLKDKRDAVRIIAERWKLAVSAAGWEPKRFIVVHV
TPKSKPPPRIIGVKGATGVGGLHPPVFDPLVDMDPRLVVSFLDLPREADISALVLRFGGE
CELVWLNDKNALAVFSDPARASTAMRRLDHGSVYYGAVIFVQSAGTSVASTANNAWGGAG
ASSALKGNPWKKAVVQELGWREDSWGSEESYGGTSDPGCVWKAKETPIASSINRWSVLDS
ERGLSSFSRTVQTEDPSKLAGVLSNSGMDSNTANSNSAGLPGGGFNEPEPSEVVDDWEKA
YE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaaggccgaaatagatcaagaaacccttcccaaagcactcgtcaagaatgg
gttgctggaggatattcatctacagctaccaccgtcgtaagcaactcagcagccaccttt
aattcaactcctaacgttagccacacctcaactcaaaatgataataggtatagaaaaatt
ggtcggcccacgaatcataggagagatagggaaaaggaaaggagtgagaatcatgtggcg
gtgaagaaggagattgatccaaatttgccacagcttgtgcaagaaattcaggacaagctt
atcaagagtacggttgagtgtatgatttgttatgatacggtacggaggtctgcccccata
tggtcgtgctcgagttgctactccatttttcacctcaattgtattaagaagtgggctagg
gcacccacctctgttgatttggtggtggagaagaaccagggttttaattggcgttgtcct
ggttgtcagtctgtgcagttgacgtcatctaaggagattcgatatgtttgcttctgtggc
aagagaacagacccaccttctgatttgtacttgacacctcattcttgtggggagccttgt
ggaaagccgcttgagaaggtgctgggactaggtgctggagtgatgaaggatgaactttgt
cctcatgtttgtgttttacagtgtcaccctggtccatgccctccttgtaaggcgttttct
ccaccacggttgtgtccttgtggaaagaaggttattacaaccagatgctctgacagaaag
ccggttcttacttgtggtcagcgctgtgataagcttcttgagtgtgggcgtcatcgttgt
gagctgatatgtcatgtgggaccttgtgatccatgccagattctgattaatgccccctgt
ttctgcaggaaaaaagttgaatttgtcatctgtggagacatggctgtgaagggagaagtg
aaagcagaagatggtatcttttcttgtagttcaacttgtggagagaagcttagatgtggc
aatcataactgtgctgagatttgtcatcctggtccttgtggggactgtgagttaatgcca
agcaagatcaagtcttgttattgtgggaaaacaagcttgcaggagcaaaggcaaagttgt
ttggacccaattccaacttgttcagaggtatgtgcaaagttccttccctgtcgagtgcac
caatgtgaccaagtatgtcattctggggattgcccaccttgttcagttcttgttacccaa
aaatgccgatgtggatcaacttctcggagggtggaatgctacaaaacaacacttgagaat
gagagatttacatgtgacaagccttgtaggcataagaagaattgtggtagacaccgatgt
agtgagcgatgctgtcctctttcaaactcgaataatcttccctctggtgattgggatcca
cacttttgccacatggcatgtgggaaaaagctaaggtgtgggcatcattcttgtgaatca
ctctgtcatagtggccactgccctccatgcttggaaacaatcttcactgatttgacatgt
gcttgtggaagaacttcaatccctcctccattgccttgtggtacgccgcctccttcatgt
caactcccatgctcagttccacagccttgtggtcattcatcttctcacagctgccacttt
ggtgattgtccaccttgttctgtgcctgtggcaaaggagtgcattggaggacatgttgtt
cttaggaacattccttgtggatcaaaagatatcagatgcaacaagctctgtggcaagacc
aggcagtgtggtttgcatgcatgtgggaggacttgtcacctagcgccatgtgatatatct
tctggatctgaaccaggtttcagaacttcttgtgggcagacatgtggtgcccctcggaga
gactgcaggcatacatgcactgcaccttgtcatccctctgcaccatgtcctgatgttagg
tgtgattctcgagtcactatcacgtgttcttgtggccgaataactgccagtgttccttgt
gatgctgggggctctactagcagtttcaatgctgatacagtttatgaagcttctattatc
caaaaattgccagtaccccttcaaccggtggattcaactggcaagaagattcctcttgga
caaaggaagcttatgtgcgatgatgaatgtgctaagttggatcgtaaacgggttcttgca
gatgcgtttgacataacttccccaaacttggatgctcttcattttggtgagaattcagtt
acatctgagttactttctgacctatataggcgtgatgcaaagtgggttttagctatagaa
gagagatgcaaggttttggtacttggcaagaacagaggaacagcaacaggtctgaagatt
catgttttctgtccaatgctgaaggataagagagatgcggtcaggataatagcagaaaga
tggaagcttgctgttagtgctgctggttgggagcccaagcgttttattgtggtccatgtt
actcccaaatccaaacccccacctcgtatcattggggttaagggggcgaccggtgttggg
ggactacatccaccagtttttgatcctctggtagacatggatccgaggcttgttgtttct
ttcctagatttgcctcgagaagcagatataagtgcattggtattaaggtttggtggggaa
tgtgaacttgtttggttgaatgacaagaatgcattggctgtatttagtgatcctgctcga
gcttcaacagcaatgaggaggttggatcatggctcagtttattatggggctgttatcttt
gttcaaagtgctggaacatcagtagcatcaactgctaataatgcatggggaggagcaggg
gcaagttcagctttaaaagggaatccgtggaagaaggctgtagtgcaggagcttggttgg
agggaagattcatggggcagtgaagaatcttatggtggcacttctgatccaggctgtgtg
tggaaagcgaaggaaactccaattgcttcttcaattaaccgctggagtgttcttgattct
gaaagaggtttaagctcattttctagaacagttcaaactgaagatccttcaaaacttgct
ggagttctatccaattcaggtatggattcaaatactgccaattcaaattcggctgggcta
cctggtggtggttttaatgaacctgagccatcggaagtagtggatgattgggaaaaggct
tatgaataa
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