Theobroma cacao (cacao): 18604523
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Entry
18604523 CDS
T02994
Name
(RefSeq) uncharacterized LOC18604523
KO
K14315
nucleoporin NDC1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18604523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18604523
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18604523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
18604523
NCBI-ProteinID:
XP_007037111
UniProt:
A0AB32VE48
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Position
3:complement(18337812..18350166)
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AA seq
489 aa
AA seq
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MHSAESGMVVKNRLVEFLIWQSIPSSLIFLVFTAMIVSGRSPAAIFISFLSFHLSQLLFS
VSLSAVSSPERKFGRSLPVMLGAAAVSGYVSAVSLCGVNGRVGFKGFASGLFYAFFYIYK
RRWVLHFPIIQRSPFFSFKMGIPSAITRALKLSAAAYLFSALLLVFLPHHFNTELELGNL
FAQHVISYSVSFSLFLCWELAHHLQQVLHTKRFIFAPPKGSAAAETNPSEPLLAALEESS
PTSLLKYLAYLDLCMVCENNVDYWRRAAFFEETGETYRRVAAVCLRPLEQLASKLGEGLE
GSSDGKAYRVSDQLQSSTDPRMNSKCYELMNNFQLYTWSARTIASLTAHSHKEDRFGVAQ
LSGSNAAVISTLIACLLAVETFMGKKSSLQPSPHLMGPAGIKWATSSIGRRDVRTGKRRD
GPLYSKAYAMADVLRTSIYCIVSAFHNEMLTNAKAGLLEKDWISSGKPPFGTRELLLQKL
LLFLDFQAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagcggagtcaggcatggtagtgaagaatcggttggtagagttcctaatatgg
cagtccattccaagtagtttaattttcttggttttcaccgcaatgatcgtctctgggcgc
tcccccgctgcgatcttcatctcctttttgagctttcatctctcccagctgctcttctct
gtctccctctcagccgtctcatctcccgagcgtaaatttggacgcagtttgccggttatg
ctgggagccgcggccgtgtcgggttatgtctcggcagtgtccctttgtggagtgaatggg
agagtggggtttaagggttttgcttccgggttgttctatgccttcttttatatatataag
cggagatgggtattgcattttcccattattcagcgttcccctttctttagcttcaagatg
gggatcccttccgctatcacacgagcattaaagctttctgctgcagcttatctattttca
gctctgctgttggtatttctgccacaccattttaacactgaactcgagctgggaaacttg
tttgctcaacatgtaatctcttattctgtcagcttttctctgtttctctgttgggaatta
gctcatcatttacaacaggtgctacatacaaaaaggttcatattcgcaccacccaaagga
tcggcagcagcagaaacaaatccaagtgagcctctcctggctgcattagaggagagttct
ccaacttcccttctgaaatatcttgcataccttgatctatgtatggtttgtgagaataat
gttgactattggcgtcgagctgccttctttgaagaaactggtgagacttacagaagagtt
gcagctgtatgcttgcggcctttggagcagcttgcatcaaaattgggcgaaggtttggaa
ggttcttcagatggtaaagcctaccgagtatctgaccagttgcagtcatcaactgaccca
cgaatgaattcaaaatgctatgaactaatgaacaacttccagctttacacatggtctgct
cgaacaattgcatccttgactgcacactcacataaagaagacagatttggagttgctcaa
ctctctggtagcaatgctgctgttatctcgacactcatagcttgcctgcttgctgttgaa
acattcatgggaaaaaaatcaagtttgcaaccatctccgcatttgatgggcccagctggc
attaaatgggctacatcgagtattggaagaagagatgttagaacaggtaaaaggagagac
ggtccactttattcaaaagcatatgccatggctgatgttttaaggacgtcaatttactgc
attgtgtctgcttttcacaacgagatgctgactaacgccaaagctggccttcttgagaag
gattggattagtagtggcaaacctccttttggaactcgcgagctgctgttgcagaaattg
cttctttttcttgactttcaagccagctaa
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