Theobroma cacao (cacao): 18605091
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Entry
18605091 CDS
T02994
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18605091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18605091
03036 Chromosome and associated proteins [BR:
tcc03036
]
18605091
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18605091
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18605091
PBAF complex
18605091
GBAF(ncBAF) complex
18605091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
18605091
NCBI-ProteinID:
XP_017973271
UniProt:
A0AB32W5R4
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All DBs
Position
3:25811498..25814813
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AA seq
562 aa
AA seq
DB search
MNNNNLPKTFAAPSQFANSGTVAQSQSMPMNNQPQLLSQAQPQPMNNQPQLLSQAQPQTQ
GGPQFPGHFQLSEPQAQVLAQAQYVQAHAQAQAQAAHSQFQAQVQSQNVSNSNATATPSP
VVSTPGSGSAKRSSQKPPSKHSSSSNSNMASLFKTMELTPAAHRKKRKVPERQIPDKVAA
MLPECALYTQLLEFEAKVDAALSRKKSDIQQSLKNPPCVQKTLRLYVFNTYSNQGQTDPD
KKSTEAPSWSLKIIGRILEDGKDPVVAGKVQKSYPKFSSFFKKITIYLDASLYPDNHVIL
WESARSPALHEGFEVKRKGDKESTARIRLEMNYMPERFKLSPALAEVLGIEVDTRPRVMA
AIWHYVKCKKLQNYEDNSFFACDPPLQKVFGEEKMKFIMVPHKITQHLTPLQPIHLEHRI
KLSGNCPVGSTCYDVLVDVPFPLEKEKSAFLANMEKNKDIDASNEVICAAIKKIHEHYQR
RAFFLGFSQSPGEFINALIASQSKDLKVFAGDASDNAEKERQSEFYNQPWIEDAVIRYLN
RKSMGGKENILSGTLDGKLPQK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaataacctaccaaagacatttgcggctccatcccagtttgcaaactctggg
actgtggcacaatcgcaatcgatgcctatgaacaatcaaccccaacttctttcacaggca
caacctcagcctatgaacaatcaaccccaacttctttcacaggcacaacctcaaacacaa
ggtgggcctcagtttccaggccactttcagttgtctgagcctcaggctcaggtgcttgca
caggcacagtatgtgcaggctcatgctcaagctcaagctcaagctgcccattcccaattc
caggctcaggtgcaatcgcaaaatgttagtaatagtaatgcgactgccaccccttcccct
gtggtttccacccctggctctggaagtgccaagcggtcttctcagaagccaccttccaaa
cattctagttcatctaatagtaatatggcttctctgtttaaaacaatggagttaacccca
gctgctcacagaaaaaagcggaaggttcctgagagacaaatacctgataaggtcgccgca
atgttaccggagtgtgctttatacacgcagttgcttgaatttgaggctaaggtggatgct
gctttgtcaagaaagaagagtgacattcaacagtcgcttaaaaaccctccctgtgttcag
aagacgcttagattatatgtcttcaatacttattccaatcagggacaaacagatcctgac
aagaagagtacagaggctccatcatggtcacttaagatcattggtagaatattggaagat
gggaaagaccctgttgttgctggaaaggtgcagaaatcataccccaaattctcatctttc
ttcaagaaaattacaatatacttggacgcaagtctctatccagataaccatgtgattttg
tgggagagtgctagatcacctgcccttcatgagggctttgaggtgaagaggaaaggtgac
aaggaatctactgcaagaataagactagaaatgaattatatgcctgaacgatttaaactt
tcacctgctttagcagaagtcctgggaattgaagtagatactcgcccaagagtcatggct
gcaatttggcattatgtaaagtgtaagaagttacagaattatgaagacaactccttcttt
gcatgtgatccccctcttcagaaggtatttggggaagagaaaatgaaattcataatggtt
ccccacaagataacacagcatttaacgcctctacaacctatacatttggagcacaggatc
aagctttcagggaactgccctgttggatctacttgttacgatgtcctagttgatgtgcct
tttccattagaaaaggaaaagtctgcattcttagcgaacatggagaagaacaaagatatt
gatgcttccaacgaagtaatttgtgctgctataaagaaaatacacgagcattatcagaga
cgagctttcttccttggtttcagccagtctcctggagagtttattaatgctttaattgct
tcgcaaagtaaggatctgaaggtctttgctggggatgctagtgataatgctgaaaaggag
cggcaatctgaattctataaccaaccatggattgaagatgctgttatccgctacctgaat
cgcaagtccatgggaggaaaagaaaacattctgagtggcactttggatggaaaacttcct
caaaagtag
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