Theobroma cacao (cacao): 18605146
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Entry
18605146 CDS
T02994
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18605146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18605146
03036 Chromosome and associated proteins [BR:
tcc03036
]
18605146
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18605146
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18605146
PBAF complex
18605146
GBAF(ncBAF) complex
18605146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
18605146
NCBI-ProteinID:
XP_007038045
UniProt:
A0A061FZ56
A0AB32VD36
LinkDB
All DBs
Position
3:complement(26133216..26136675)
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AA seq
595 aa
AA seq
DB search
MAIPFLPSINIANPESDPKRHKSKLAKDPGMENNTRHDPNPESTRPEEPELDLYTIPSYS
SWFAWNDIHETERQALKEFFEGSSISRTPKIYKEYRDFIINKYREDPSRRLTFTEIRKSL
VGDVTLLHKVFIFLETWGLINFVSPPRPHEGSEKDDTVRVEDGAPNGVRVVATPNSLRPL
SAPVVKGKSSDGGAGEGVLKLPPLASYSDVFGDLKRLRCGNCGDCDSEYYEYNKDHFVVC
VKCFKSGNYGENKSMDDFNLKNGSGNSATNGAVWTEAETLLLLESVLKHGDDWDLVAQDV
QTKSKLDCITKLIELPFGESLIDSVNGRANSSGPSMNMNSVKPVPVPSEHQENIRNEDQG
PNLGHDDTNENEQNGDSENEEPPLKKKRTASISDADSSLMKQVALISTMVGPQITAAAAE
AAVAVLAEEMACPREIFDGDEINLTNGLPSPTSIGQPERAYHDEESEMKERASPSETQET
SPKKNDVPLPLRIRAAVATGLGAAAAHAKLLAEHEEREIEHLVATIIEAQLKKLHSKIKH
CEDAELLMKKEYAAIEDLREYIIGERINILRRTFTTGIPKLRVHTSVQSQTANLS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccattcttgcccagtattaacatagcaaatcctgaatcggacccaaaacga
cataaatccaaactcgccaaggacccgggaatggagaacaacactcgccacgatccgaat
ccggagtcaactcgacccgaggaaccagagctcgacctctacacaatcccaagctattcc
agttggtttgcttggaacgatatccacgaaacagagaggcaagcattgaaagaattcttc
gaaggaagctcaatctcaagaacccccaaaatctacaaagagtacagagatttcatcatc
aacaaatacagggaagacccttcgcggcgcctcactttcaccgaaatccgtaaatccctc
gtcggtgacgtcaccttgctacacaaggttttcatcttcttggaaacctggggtttgatc
aacttcgtctctccgccgcgaccccacgaaggttccgagaaggatgatacggttcgggtc
gaagacggggctccgaatggggtgcgggtcgtggccactcccaattcgttgcggccgctg
tctgcgccggttgttaaagggaagagcagtgatggtggggctggggagggtgtactcaag
ttgccgcctctggcatcgtattcggatgtctttggtgatttgaagcggctacgttgtggt
aactgtggagattgtgattctgaatactatgaatataataaggatcatttcgtagtttgt
gtcaaatgcttcaaaagtggaaattatggagagaataaatctatggatgatttcaatttg
aaaaatggcagtgggaacagtgctaccaatggagctgtgtggactgaagcagaaactcta
cttcttttggaatctgttttgaaacatggggatgactgggatcttgttgctcaagatgtt
caaaccaagtctaaacttgactgtattacaaagctcattgagctgccttttggggagtct
ttgatagattctgttaatggaagggccaattccagtggccccagtatgaacatgaatagt
gtaaaaccagttcctgttccatctgagcatcaagagaatattagaaatgaggatcaaggg
ccaaatctaggtcatgacgacacaaatgagaatgaacaaaatggggattctgagaatgaa
gagcctcctttgaagaaaaaacgcactgcttccatttctgatgctgatagttctctcatg
aagcaggttgctctgatctcaaccatggtcgggccgcaaatcactgctgctgcagctgag
gctgcagttgcagtacttgctgaggaaatggcatgtccaagggaaatatttgatggtgat
gagattaatttaaccaatgggttgccatctcctacttcgattggtcagccagaaagagcc
tatcatgatgaagagtcagagatgaaggagagggccagtccatcagaaactcaagagaca
tctccaaagaagaatgatgtgcctctacctttgcgaattagagcagcagttgcgactggt
ctgggagctgctgctgctcatgcaaaattattggctgagcatgaagagagggagattgaa
catttagttgcaaccataatcgaggcacaattgaagaaattgcactctaaaatcaagcat
tgtgaagatgcagagctgctaatgaagaaggaatatgctgcaattgaggatctaagagag
tatatcataggggagcggattaatatcttacgaaggacatttactactggtatacctaaa
ttgcgagtgcacacttctgtacaatcacaaacagccaacttaagttaa
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