Theobroma cacao (cacao): 18605162
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Entry
18605162 CDS
T02994
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18605162
Enzymes [BR:
tcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
18605162
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18605162
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
18605162
NCBI-ProteinID:
XP_007038074
UniProt:
A0AB32VCJ5
A0A061FYH3
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Position
3:26216411..26224131
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AA seq
396 aa
AA seq
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MKRKRGKEGGEEEEKEEEKNKRKMDIVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHV
NKRWEGKTIVDLFTQEFRGRPNDYYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRH
EPPVMAWDVAILQNEPDVLTVCKPASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLD
RLVSGLLIVAKNPAKADIFRQHIEAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRS
TAEVGISNGDTTLKGKVACTKFTRISTNGIHSIVLCEPTTGRTHQIRVHLQCTGHPIAND
MLYLSDNVVDRSTLGMTADRAAALSCSCPVTSCENHNEEYKVSSEDFSIDPMCSHCPNLA
PNGYNGHEEGLWLHCVRYSGPGWVYECPYPDWASLS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaaagaggaaaagaaggaggagaagaagaagaaaaagaggaagagaaaaac
aaaaggaagatggacattgtttggcaaactccagctcatcctgctcataaagacgattat
atatttcacaacgggaagcgctacgtaagaccgtactactttgagttcgtatctcatgtt
aataaacgatgggagggaaaaacaatcgtggatttgtttactcaagaatttagaggccga
cctaatgattactatgttagtgctgtcaaatgtggacgtatacaagttgatggagagaat
atacctgtttcatacaaagttaaacgatgtcagaagataagccactttgtacacaggcat
gaaccaccagtgatggcttgggatgttgcaattcttcaaaatgaacctgatgtactgacg
gtgtgcaaaccagcatctgttcctgtacatccatgtggtcaatatcgtaaaaacacagtt
ttgggcattctccaagcagagcatgggttgtctcctttgtatcccattcatcgactagat
cgtctggtctcgggactgcttatcgtggccaaaaatccagctaaagctgacatttttagg
caacatattgaagctggactggtgcagaaacagtatgttgcaaaggtcattggagtattt
ccggagtgtgagcaagttgttgatgccaatgtagattacaatgctagagagggaaggagc
actgcagaggttggcatctctaatggtgatacaacattgaagggaaaggttgcttgtact
aagtttaccagaattagtaccaatggaattcatagcattgtcttgtgtgaaccaaccact
ggccgaactcatcaaatacgtgtccatttgcagtgtacaggccatccaatagccaatgac
atgctttacctttcagacaatgttgttgatcgctctactttggggatgactgctgataga
gctgcagctctttcttgcagctgtccagtaaccagttgtgagaatcataatgaggaatac
aaggtctctagtgaagatttcagcattgatcctatgtgttcacactgtccgaatttagct
ccaaatggatataacgggcatgaagagggattatggctacattgtgttcggtactctgga
cctggatgggtttatgaatgcccatacccggattgggcatcactcagttaa
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