Theobroma cacao (cacao): 18605339
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Entry
18605339 CDS
T02994
Name
(RefSeq) structural maintenance of chromosomes protein 6A
KO
K22804
structural maintenance of chromosomes protein 6
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18605339
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
18605339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Sipho_Gp157
AAA_15
AAA_29
GPS2_interact
SbcC_Walker_B
SMC_hinge
AAA_21
DAGK_cat
WASH_WAHD
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
18605339
NCBI-ProteinID:
XP_017973933
UniProt:
A0AB32W764
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All DBs
Position
3:27296624..27310135
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AA seq
1058 aa
AA seq
DB search
MSYSRVLPDQIYGGQRSGAGTIKRIRLENFMCHSSLEIELCEGVNFITGQNGSGKSAMLT
ALCIAFGCRAKDTQRASKLKEFIKTGCSYAIVQVEIKNEGVDAFRPEIYGDYIMIERRIS
DSTSSTFMKDRQGKKVASRKEDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFK
FFFKATLLQQVDELLQTIIKQLKDAFALVDELETLIRPIQLELSELQEKIKNMERVEEIS
REVQQLKKKLAWSWVYDVDRQLQEQGAKIEKLKDRIPTCQAKIDSILHNLEKLQEHFSNK
KVQVACLVEKTSLVRRRKDELWDAFCVATKEKLELEEEHGRSTKQIQKMLNNVRMLEEQA
RDIQEKHFRNTQAEESEIEEQIKEIEYAVDHVKSILSSLKDEGNTLSEHASAEADVMKKI
NDEIKDYEKKQREIDRQIRELQLHQTNRVTAFGGDGVLRLLREIERHHHKFTMPPIGPIG
AHVTLVNGDTWAPAVEQAIGKLLNAFIVTNSKDASALRTCAKEARYNYFPIVIHEFSRPR
LNIPNHSLPQTKHPTTLSVLRSDNPTVFNVLVDTVKAERQVLVKDYNIGRAVAFDQRIPN
LMEVFTLDGFRMFSRGSVQTILPSNKKLRIGRLCGSFDDQIKEFEKHALSVDVEIKQCKS
RKRESEKKLWDFDSRLHNVKRRRLDVERDLTAKSMKLRDVQNSLVAEAGVSPESTTNELL
QEISNVKMEIQQKEALLETLRERMIEAEAKARTLKLSFEDLGESTKGEIVAFQKAEEELT
EIEKEINAAQAMRAHYESVMNDKVLPLIKEAEAQYLDLENSRKESYRKASVICPESEIEA
LGGWDGSTPEQLSAHLNRLNQRLKHESHQYSESIDDLRMLYQEKEHKILRKLQTYKAFRE
KLDACQKALDLRWKKFNRNASLLKRELTWQFNGHLGKKGISGHINVSYEEKTLSVEVKMP
QDASSGIVRDTRGLSGGERSFSTLCFAMALHEMTEAPFRAMDEFDVFMDAVSRKISLDTL
VEFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagttattctagggtattacccgatcaaatctacggcggtcaacgatccggggcgggt
actatcaagaggatccggttagaaaacttcatgtgccatagtagtctcgaaatcgaactc
tgcgagggggttaatttcatcaccggtcaaaatggaagcggtaagagtgcgatgctgacc
gctttatgtattgcgtttggctgccgtgccaaagatactcaaagggcatctaagttgaaa
gaatttataaaaactggttgcagttatgctattgttcaagtggaaattaaaaatgaggga
gtggatgcttttcgaccagaaatttacggtgattacataatgattgaacgcaggatttct
gactctacaagctccacttttatgaaggatcgtcaaggtaaaaaagttgctagtcgaaag
gaggatcttcgtgagctggttgaacatttcaatattgatgttgagaatccatgtgttatt
atgagtcaagacaaaagcagggagtttttgcattctgggaatgacaaagataaattcaag
ttcttttttaaggctacgcttcttcaacaagttgatgaacttttacaaacaattatcaaa
caattgaaggatgcatttgctcttgttgatgagttggagactttgataagacccattcag
cttgaacttagtgaactgcaagaaaagattaaaaacatggagcgtgtagaagagatatca
cgggaggtgcaacagttaaaaaaaaagctcgcctggtcatgggtgtatgatgtggacagg
caattgcaggagcaaggggctaagattgaaaagctgaaagaccgcatacccacttgccaa
gctaaaatagattcaatattgcataacttggagaagttgcaggaacacttctcaaacaag
aaagttcaagttgcatgtttggtggaaaagacatctttagtgaggagaagaaaagatgaa
ttgtgggatgctttttgtgtggcaacaaaagagaagcttgagctagaagaagagcatggc
cgcagcactaagcaaattcagaagatgctgaataatgttaggatgcttgaagaacaagcc
cgtgatattcaggagaaacattttagaaatacacaggctgaagaatcagaaatagaggaa
cagattaaagaaattgaatatgcagttgatcatgtcaaatcaatactctctagtttgaag
gatgaggggaatactttgtcagagcatgcttcagcagaagcggatgtaatgaagaagatt
aatgatgagattaaagactatgaaaagaagcagcgtgagattgatcgtcaaattcgtgag
cttcagctacatcaaaccaacagggttacagcttttgggggagatggggtgcttcgtctt
ctacgtgaaattgagaggcatcatcacaaatttacaatgccacctattggtccaataggt
gcccatgtgacattggtcaatggtgatacatgggctcctgctgttgaacaagccattggg
aagttgctcaatgctttcattgtgacaaattctaaggatgcttctgctttgagaacatgt
gcaaaggaggcaagatataactactttcctattgtcatacatgagttttcaagaccaagg
ttgaatataccaaatcactcgcttccccagaccaagcacccaactactctatccgtttta
cgttctgataaccctactgtttttaatgttctagtagatacggttaaagctgagaggcaa
gttcttgttaaagattacaacattggaagagcagttgcatttgaccaaagaataccgaat
ttgatggaggttttcaccttagatgggtttagaatgttttcacgtggttcagtccagaca
attcttccctcaaataaaaagcttagaattggtcgcctttgtggttcttttgatgatcaa
attaaggagtttgaaaaacatgcgttaagtgttgatgtagaaattaaacagtgcaagagt
aggaagagggagtcagagaaaaagctttgggattttgacagcaggctacataatgtgaag
agaaggcgcttggatgtagagcgtgatttgacggcaaagagcatgaaactgcgggatgtg
cagaattcacttgttgctgaagctggtgtgtcacctgagtcaactactaatgaacttctt
caagaaatttcgaatgttaaaatggagatccagcagaaggaagcattgctagaaacgctc
cgagagaggatgattgaagcagaagcaaaggccagaactcttaagttatcatttgaggat
ttaggcgagtcaacaaaaggggagattgtagcctttcagaaagcagaggaggagctaaca
gagatagagaaagaaataaatgctgcacaagcgatgagggcccattatgaaagtgttatg
aacgacaaggttcttcctcttatcaaggaggcagaggcacaatatctggatcttgaaaac
agtcgtaaggagagttatagaaaggcttctgttatttgtcctgagagtgaaattgaagcg
ttaggaggttgggatggaagcacaccagagcaactaagtgcgcacttaaacagactgaat
cagagacttaagcatgagagccatcaatattcggaatcaattgatgatcttaggatgttg
tatcaggagaaagaacataagattttaaggaaactgcaaacgtataaagcttttcgagaa
aaattagatgcttgtcaaaaagctcttgacttgcgttggaaaaagtttaatcggaatgca
tctcttcttaagcgcgagttgacttggcaatttaatggccatttgggaaagaaaggtatc
agtggacacattaatgttagttatgaagaaaagaccctttcagtagaggttaaaatgcct
caagatgcatcaagcggcattgttcgtgatacaagaggactttcaggaggggagcgctcc
ttctcaacgctatgctttgcaatggctcttcatgaaatgactgaagccccatttcgagca
atggatgagtttgatgtgtttatggatgcagttagccgaaaaatcagtttggacacttta
gttgagtttgcactggcacaaggatcccaatggatatttatcacacctcatgatatcagc
atggtgaagcaaggtgagaggataaagaaacagcagatggcagccccccgttcttga
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integrated database retrieval system
