Theobroma cacao (cacao): 18605559 Help Entry 18605559          CDS       T02994                                  Name (RefSeq) uncharacterized LOC18605559   KO K28108   shortage in chiasmata 1 Organism tcc  Theobroma cacao (cacao) Brite KEGG Orthology (KO) [BR:tcc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:tcc03036]     18605559 Chromosome and associated proteins [BR:tcc03036]  Eukaryotic type   Meiosis-specific proteins    Others     18605559 SSDB OrthologParalogGFIT Motif Pfam:  SHOC1_PDDEXK_dom SHOC1_2HhH SHOC1_ATPase SHOC1_HhH_tandem ZIP2_M Motif Other DBs NCBI-GeneID:  18605559 NCBI-ProteinID:  XP_017972859 UniProt:  A0AB32W2M9 LinkDB All DBs Position 3:complement(28736803..28746777) Genome browser AA seq 1623 aa AA seqDB search MRTRFLNTDYFTSSHSPTETLSFLNLPLPQLPPWHLSTFKDELLRFDSFLNVPLETDRLP IDAALSKFLSDTIPQFIDVDFRDLEDTRSPIGNVEARFSEKDNVTSADDKDVQRFDVILF ETPELDTFLDNARFSEKEIETFSGIPEIDNNQDETEPIVQYSNKIQESVYSVEYVTSKYN MEKNDYMLEEDSSFEDLLLLQHNTFPFLEVDEVSLGIISHSLDDVLPSVFESIDTQLWTQ ENNVLIASKELLGSIGYDIFKFLSDHCLLKQFPEPELAFPEMFLDMNLICVVETPQVDEN FEFYMAKHDADCFLPMSLVIFEEFQIFDVDSSQNFEVFLNREMTREPEACDYMFREDMNL KSFNELVVSHELVLVDETFKSLPIPVLSDYRRMRSTCTVVEELLSELKLLPLSASDGIYL DWYILEEDKCNSKVYSLFQNMVEEIDSYNIDFDQETFEDGKLVSEFIFSDDALSESATEQ YEEALNVSYDSTAMLNGHLMAVVSGNLEDNGCPKPGNSEQLAEKDAKRASLLFESMSQFN DLDFFLNPQKGSAGESAGPTAVAFDSNAMLPNVSSGPSVQACASTGVKLKQWDIMVYNIK LSDDIVALIEKFEKSYLAILQNETELISFLPADNFELLSLPKQKLMECIKKKMVRRTTSH KDEDIMAFVTLCAIKQMAWYMCFYGIHAARLYVDKLCQSLGCLKSRLSFLHSLIEDTCGK VDTEITRSHPSLCVIQGILQSNISPSSSKVLILAEQVFWWSLKSLLMSIGLSWNELSSFC TSANASDVYKMDSQLISDCWLVSQEHVSASFPFNKFNLIVEYGGSCGSSRVSSFSTELVG LNHLHFVKIELDGSSASKALCQGVNVPQTTKKLMEGEFHSILALDDNVNYQKLEDLLNFV PIEAKYNKKSVEGVDKIEAHFMPLPVAVENKQTQQRKMDIVIIVNTQNFDKEMIVSRRST YQKILAMEKEGAQVVERDLNLPVDVIISSAICLVWYDCRNIGGKAATLDAASSCLPLWIE NIATNILTLLSFTFSGCFLVFEGEVPFLSTVMESSAGLYAAAASLGIDFQLFCSYSSELT DEIILNCIDYAAKMTRGLYPRMPDSETLAESFLTKFPSINPLTAHAILSSGGVLIEFLEW SHERRIHAVQNYCVPDESVALFSALCKYGEREDSKSIMTDCSSSVSSGPDSDKCDLNVGS EGKQGRKHINSPDKTSISMDELLHVEPLNQCTDDFLNPSGLSKPYNSWMSKGSKDFQDYK KHSSSLNYIFDQKQQFGLPAYLSLEVPKQYDSHIFEGPQILNEAKKPKLSVPLKDNIWGH RQGENMAMLNSLDGQNINKFENRHEDPLDEVIDLIDSPMSGEDFSSFDNSIPFSMVPKIE NDSTRKSKIARKLSFRKGSRTVFPYVSEISTDSDILSSVKYPRDSFQGTNDNPGAGYNDK LPFSNQENLIWDVLAQGSAACKHSLLKNDVSNHRATPLSKAILSAHPPPGSPWTIEFLNR IREKSRLHHQNLPSDTSASPFEISRNVAKVPKRRSPSMLEFFKYQGSSTPRKILEKRKQK RYLQSSNSSKNEKASSSLSQTRTPIDKRARQTLSFAMNESGSQTKLVWSDGGAHGLSKKL RNQ NT seq 4872 nt NT seq  +upstreamnt  +downstreamnt atgcgaactcgatttctcaataccgactacttcacctcatctcattctccaaccgaaacc ctaagcttccttaatctaccgctccctcagttgcctccttggcatctttctaccttcaaa gacgagcttctccgctttgattcgtttctcaacgtacctctcgagaccgacagattgccg atcgatgccgctctctcaaagtttttgtccgacacaattcctcagttcatcgacgtcgat ttcagagatttggaggatactcggtctccaattggaaatgtcgaagccaggttctccgag aaggataatgtaaccagtgctgatgataaggatgtgcaaaggtttgatgtgatcctgttt gaaacaccagagctggatactttcttggataatgctcgcttttctgagaaagagattgag acattctctggaattccagagattgataataatcaggatgagacagaacctatagtgcag tattctaacaagattcaagaatcagtttattcagttgaatatgttacttcaaagtacaac atggagaaaaatgattatatgcttgaagaggatagttcttttgaggatctgttgctttta cagcataacacctttccttttttggaggtggatgaagtaagtctgggcatcataagtcat tctctggatgatgtacttccttctgtttttgaatctattgatacccagctctggactcaa gaaaataatgtactcattgccagcaaggagctcttgggctctattgggtatgatatcttc aagtttctttctgatcactgtttattaaaacaatttcctgaacctgagctggcattccca gagatgttcctggacatgaaccttatatgcgtggtggaaactcctcaagttgatgagaat tttgaattttatatggctaaacatgatgctgattgttttttgcccatgagcctggtcatt tttgaggaattccagatttttgatgtggactcatctcaaaattttgaggtgtttctgaac cgagaaatgacccgtgaacctgaagcatgtgactatatgttcagggaagacatgaattta aagagtttcaatgaattggttgttagtcatgaacttgtgctggtagatgaaacattcaaa tctttgcctatacctgttctctctgattacagaaggatgaggtcaacatgtacggttgtt gaggaattactgtctgagttgaagttactgcccctatctgcatctgatgggatctacttg gactggtatattttggaagaagataaatgcaacagtaaagtttattctttgtttcagaat atggtagaggagatagactcatacaacattgattttgatcaggaaacttttgaggatggg aagttagtatctgaattcattttctcagatgatgctttaagtgaatcggctactgaacaa tatgaggaagcactgaatgtcagttatgatagcactgctatgcttaatggtcatcttatg gcagttgtgtcaggtaatttagaagacaacggatgcccaaaaccaggtaactcagaacaa ttagcagaaaaagatgccaagagggcttcattgctatttgagtctatgtcacaattcaat gatcttgattttttcttgaatccccaaaaaggtagtgcaggagaaagtgctggacctaca gctgtggcattcgattcaaatgctatgttacccaatgtttcatctggtccttcagttcaa gcatgtgcatccactggtgtaaaattgaagcagtgggatatcatggtttacaatataaaa ttgtcagatgatatcgtggctctaattgaaaagtttgaaaagagctatctggctatcctg cagaatgagacagagttaatctcatttttacctgcagataattttgaattgcttagcctt ccaaagcaaaagttaatggagtgtattaagaaaaaaatggtgcgaagaacgacttctcat aaagatgaagacattatggcatttgtgacattgtgtgcaattaagcaaatggcttggtac atgtgtttctatggcatccatgcagctcgcttatatgtggacaagctatgtcaaagcctt ggctgcctgaagtcaagactaagtttcctccattccttgattgaggatacatgtggcaag gttgacacggaaataaccagatcacacccctcactctgtgttatacaaggaattttacag tcaaacatcagtccaagtagttcaaaagtgttgattttggcagagcaagtcttctggtgg tccttgaagagtttgttgatgtcaattgggctatcatggaatgagttatcaagtttctgc acaagtgcaaatgcatcagatgtctataagatggattctcagctgatttcagattgttgg ttggtgtctcaggagcatgtttctgcatcttttccattcaacaagttcaaccttattgtg gaatatggaggctcgtgtggttcatctagagtgtcttccttttccactgagttggttggc ttgaatcatcttcactttgtgaagattgaactggatggctctagtgcatctaaagcactc tgtcaaggtgttaatgtgccccagactacaaagaagttgatggaaggagagtttcattca atcctggccctggatgataatgtgaattaccagaagttggaggacctactgaactttgta ccgattgaagccaagtataataagaaatctgtcgagggtgtggataaaatagaagctcac tttatgcctctgccagttgccgtggaaaacaagcaaactcagcagagaaaaatggacata gtaattattgtgaacacgcaaaattttgacaaggaaatgattgtatccagaagaagtaca tatcaaaagattcttgcaatggagaaagaaggagctcaagtggtggaacgtgatttaaat ctgcctgtggatgtcataattagttctgcaatttgcttagtgtggtatgattgcagaaac attggaggaaaagctgccactttagatgcagcatcttcatgcttaccattgtggattgag aatattgcaactaatattttgacattgctgagttttactttcagtggctgtttcctggtt tttgagggagaagttcccttcctttctactgtaatggaatcctcagctggactctatgca gcagcagcaagtttgggaattgacttccagctcttttgttcttattcatctgagttaact gatgaaattatattaaactgcattgactacgctgctaagatgaccaggggcttatatcct aggatgcctgattcagaaactcttgcagaatcattcctcacaaaatttccttcaattaat cctttgacagctcatgcaatactctcttcaggaggagtgctcattgagttccttgagtgg tcacatgaacgcaggatccatgcagtccaaaactactgtgtaccagatgagagtgttgct ctgttcagtgctttgtgcaagtatggtgagcgggaggactcaaaatccataatgacagac tgctcttcttcggtatcttctggtcctgactctgacaagtgtgatcttaatgttggttct gaaggaaaacaaggaagaaaacacataaatagccctgataaaaccagcataagtatggat gagttgctgcatgttgagcctttgaaccaatgcacagatgacttcctgaatccttctgga ctgtcaaagccatataattcttggatgtctaaaggttccaaggattttcaggattacaaa aaacacagttcatctttgaactatatatttgatcaaaagcagcaatttggtttaccggca tatttgagccttgaagtgccgaagcaatatgattctcacatctttgaaggtcctcagata ttaaatgaagcaaaaaagcccaaactgagtgtacctttgaaagataatatttggggtcac aggcagggagaaaatatggctatgctgaacagtttggacgggcagaacatcaataagttt gaaaatcggcatgaggaccctctagatgaagttattgacctcattgacagtccaatgtca ggtgaggatttctcttcctttgataattctattcccttctctatggtgccgaagattgaa aatgactctacaagaaagtctaaaattgctagaaaattgtctttcagaaaaggcagtcgc actgttttcccatatgtttctgagatcagcactgattcagatatattgagttctgtaaaa tatcctagagatagtttccaaggaactaatgataatccaggtgcaggttataatgataag ctgcctttcagtaaccaagaaaacctcatttgggatgttttagctcagggctctgcagct tgcaaacattcattactcaaaaatgatgtatcaaatcatagagcaacaccactctcaaag gccattctttcagcccatccaccaccaggttcaccttggacaatagaatttcttaacaga atcagggagaagagcagattacatcaccagaatcttccttctgatacatctgcttcacct tttgagatatcaagaaatgtagcaaaagttcctaagagaagaagtccgtcaatgcttgaa tttttcaaataccaaggaagtagcactcctcggaaaatactagaaaaaaggaagcagaaa agatacctacaatcatccaactcatctaagaatgaaaaagcgtcatcctccctttcgcaa acacggacacccattgataagagagcaagacagactctatcttttgcaatgaatgaaagt ggaagtcaaactaagctggtttggagcgatggaggtgctcatggtttgagcaaaaagctc cgcaatcaatag

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