Theobroma cacao (cacao): 18605719
Help
Entry
18605719 CDS
T02994
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18605719
Transcription machinery [BR:
tcc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
18605719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
DUF6697
Sulfatase_C
GerE
Put_DNA-bind_N
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
18605719
NCBI-ProteinID:
XP_007038959
UniProt:
A0A061G0S7
A0AB32VE24
LinkDB
All DBs
Position
3:29594413..29598389
Genome browser
AA seq
516 aa
AA seq
DB search
MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA
KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE
GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR
RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA
KENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQ
EEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcagtgtttctagctcagctgcccgaactccgctagggttaagcacaaag
ttttctactcaaagatgtacatcgagaaggcctttgactgttgcatttaaagcagataaa
tccgataatactgctttagttacacctcaagagcatattcttttacctatagaaacagct
aaggagcacccaaagagacgaggaaaagctaagaaggatcctaaaattgtaaatcatgtc
tttaccgatgacggttctccatgtaccttggaagtggattacaatgaagctgctgccaaa
cttgaaaacatttataagcttagccctgcaactagatcatctgatgtagaagaggtagaa
ggtaagataaaaggacgacggcaaaggagaaagaggtctaaagaaagtgatgagaaagga
gttaactctaacgaccagatcgtggttaggaaccagactaataggattaaaagattgagt
cttgataatagaattgcactgaaaaagaacagagaagaaaaacctgttgtttctgttcgg
aggaaaaagagtagtgagaatgaaagtgagaagattgataggcttgtgagggactattca
gcttcaactgatttggttagcctggactggagaaagatgaagatacctcccgttctgcca
tctattgaacatacttggttgtttaagttaatgcagcccatgaaggcactgcttcaggca
aaagagaacttgcaaaaggatttgggtagagatccaactgaagatgaattagctgaggcc
acaaatatgagcgcagctcaagtaagaaaacatttagaagtcggtcaagctgctagaaac
aagctgattaagcataatctccggcttgttctgttttcgataaacaaatattttcaagat
tttgcaaatggcccaagatttcaagacctttgtcaggcaggagtcaaaggacttattaca
gccattgatcgttttgaaccaagaaggagattccggctctccacatacagtcttttctgg
attaggcacgcaattatacgctccatgacactatcaagcttcacacgtgtctcatttgga
cttgagtcggttagagtagaaatccaaagagccaaacttgaattattgtttgaacttcat
agagaaccaacagaggaagaaataattaaaaaagttgggatctctcctgagaggtaccaa
gaagtaatgagggcctcaaaacctgttgcctctcttcattcaaggcattcagtcacacaa
gaagagttcatcaacggaatcactgacatcgatggtgttggaggtgatcaccggaggcaa
cctgctcttctccggcttgcacttgatgatgtgcttgattctctgaagcctaaggagagc
ctggtgatcagacagagatatggactagatggtaaaggtgatagaacattaggagaaatt
gctgggaacttgaatatttcaagagaaatggttcggaagcatgaagtaaaggcgctaatg
aagctcaagcatccagcccgagtggattatcttcgtcgatacgttgtctaa
DBGET
integrated database retrieval system
